Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.17■■□□□ 1.94
Pcdhb4Q91XZ6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.15■■□□□ 1.94
Pcdhb4Q91XZ6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.08■■□□□ 1.93
Pcdhb4Q91XZ6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.08■■□□□ 1.93
Pcdhb4Q91XZ6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Pcdhb4Q91XZ6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Pcdhb4Q91XZ6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pcdhb4Q91XZ6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Pcdhb4Q91XZ6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdhb4Q91XZ6 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Pcdhb4Q91XZ6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.99■■□□□ 1.91
Pcdhb4Q91XZ6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Pcdhb4Q91XZ6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.95■■□□□ 1.9
Pcdhb4Q91XZ6 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Pcdhb4Q91XZ6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
Pcdhb4Q91XZ6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.87■■□□□ 1.89
Pcdhb4Q91XZ6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.86■■□□□ 1.89
Pcdhb4Q91XZ6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.85■■□□□ 1.89
Pcdhb4Q91XZ6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Pcdhb4Q91XZ6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.82■■□□□ 1.88
Pcdhb4Q91XZ6 Rab21-202ENSMUST00000218831 843 ntBASIC26.81■■□□□ 1.88
Pcdhb4Q91XZ6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Pcdhb4Q91XZ6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Pcdhb4Q91XZ6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Pcdhb4Q91XZ6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
Pcdhb4Q91XZ6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb4Q91XZ6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
Pcdhb4Q91XZ6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb4Q91XZ6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.64■■□□□ 1.86
Pcdhb4Q91XZ6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.64■■□□□ 1.86
Pcdhb4Q91XZ6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb4Q91XZ6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Pcdhb4Q91XZ6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb4Q91XZ6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhb4Q91XZ6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhb4Q91XZ6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Pcdhb4Q91XZ6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb4Q91XZ6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb4Q91XZ6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.52■■□□□ 1.84
Pcdhb4Q91XZ6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdhb4Q91XZ6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.84
Pcdhb4Q91XZ6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.51■■□□□ 1.83
Pcdhb4Q91XZ6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Pcdhb4Q91XZ6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhb4Q91XZ6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.48■■□□□ 1.83
Pcdhb4Q91XZ6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb4Q91XZ6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb4Q91XZ6 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.48■■□□□ 1.83
Pcdhb4Q91XZ6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhb4Q91XZ6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Pcdhb4Q91XZ6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
Pcdhb4Q91XZ6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.43■■□□□ 1.82
Pcdhb4Q91XZ6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Pcdhb4Q91XZ6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Pcdhb4Q91XZ6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Pcdhb4Q91XZ6 Zxda-201ENSMUST00000117281 2621 ntBASIC26.36■■□□□ 1.81
Pcdhb4Q91XZ6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb4Q91XZ6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
Pcdhb4Q91XZ6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Pcdhb4Q91XZ6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhb4Q91XZ6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhb4Q91XZ6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.28■■□□□ 1.8
Pcdhb4Q91XZ6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhb4Q91XZ6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Pcdhb4Q91XZ6 Gm25262-201ENSMUST00000174934 133 ntBASIC26.26■■□□□ 1.79
Pcdhb4Q91XZ6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhb4Q91XZ6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.23■■□□□ 1.79
Pcdhb4Q91XZ6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Pcdhb4Q91XZ6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Pcdhb4Q91XZ6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Pcdhb4Q91XZ6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Pcdhb4Q91XZ6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhb4Q91XZ6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Pcdhb4Q91XZ6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Pcdhb4Q91XZ6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
Pcdhb4Q91XZ6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhb4Q91XZ6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb4Q91XZ6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb4Q91XZ6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb4Q91XZ6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhb4Q91XZ6 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Pcdhb4Q91XZ6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Pcdhb4Q91XZ6 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdhb4Q91XZ6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
Pcdhb4Q91XZ6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhb4Q91XZ6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdhb4Q91XZ6 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.92■■□□□ 1.74
Pcdhb4Q91XZ6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdhb4Q91XZ6 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.91■■□□□ 1.74
Pcdhb4Q91XZ6 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdhb4Q91XZ6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Pcdhb4Q91XZ6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Pcdhb4Q91XZ6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhb4Q91XZ6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdhb4Q91XZ6 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdhb4Q91XZ6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhb4Q91XZ6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.83■■□□□ 1.73
Pcdhb4Q91XZ6 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhb4Q91XZ6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Pcdhb4Q91XZ6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms