Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC31,77■■■□□ 2,68
Ddx41Q91VN6 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31,76■■■□□ 2,67
Ddx41Q91VN6 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31,74■■■□□ 2,67
Ddx41Q91VN6 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31,74■■■□□ 2,67
Ddx41Q91VN6 Gm8109-201ENSMUST00000194076 746 ntBASIC31,74■■■□□ 2,67
Ddx41Q91VN6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC31,7■■■□□ 2,67
Ddx41Q91VN6 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31,7■■■□□ 2,67
Ddx41Q91VN6 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31,65■■■□□ 2,66
Ddx41Q91VN6 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31,58■■■□□ 2,65
Ddx41Q91VN6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31,53■■■□□ 2,64
Ddx41Q91VN6 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31,53■■■□□ 2,64
Ddx41Q91VN6 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC31,52■■■□□ 2,64
Ddx41Q91VN6 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31,51■■■□□ 2,63
Ddx41Q91VN6 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31,51■■■□□ 2,63
Ddx41Q91VN6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31,5■■■□□ 2,63
Ddx41Q91VN6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31,47■■■□□ 2,63
Ddx41Q91VN6 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC31,36■■■□□ 2,61
Ddx41Q91VN6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC31,36■■■□□ 2,61
Ddx41Q91VN6 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31,35■■■□□ 2,61
Ddx41Q91VN6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31,34■■■□□ 2,61
Ddx41Q91VN6 Gm17082-201ENSMUST00000166043 1091 ntBASIC31,34■■■□□ 2,61
Ddx41Q91VN6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC31,25■■■□□ 2,59
Ddx41Q91VN6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31,17■■■□□ 2,58
Ddx41Q91VN6 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31,17■■■□□ 2,58
Ddx41Q91VN6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31,15■■■□□ 2,58
Ddx41Q91VN6 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC31,12■■■□□ 2,57
Ddx41Q91VN6 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31,11■■■□□ 2,57
Ddx41Q91VN6 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31,11■■■□□ 2,57
Ddx41Q91VN6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC31,09■■■□□ 2,57
Ddx41Q91VN6 Gm27322-201ENSMUST00000184007 104 ntBASIC31,09■■■□□ 2,57
Ddx41Q91VN6 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31,08■■■□□ 2,57
Ddx41Q91VN6 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31,07■■■□□ 2,56
Ddx41Q91VN6 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC30,99■■■□□ 2,55
Ddx41Q91VN6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30,98■■■□□ 2,55
Ddx41Q91VN6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30,98■■■□□ 2,55
Ddx41Q91VN6 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30,97■■■□□ 2,55
Ddx41Q91VN6 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC30,95■■■□□ 2,55
Ddx41Q91VN6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30,92■■■□□ 2,54
Ddx41Q91VN6 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC30,91■■■□□ 2,54
Ddx41Q91VN6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30,79■■■□□ 2,52
Ddx41Q91VN6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30,78■■■□□ 2,52
Ddx41Q91VN6 Gm24804-201ENSMUST00000174982 85 ntBASIC30,77■■■□□ 2,52
Ddx41Q91VN6 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,52
Ddx41Q91VN6 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC30,75■■■□□ 2,51
Ddx41Q91VN6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30,74■■■□□ 2,51
Ddx41Q91VN6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC30,74■■■□□ 2,51
Ddx41Q91VN6 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC30,73■■■□□ 2,51
Ddx41Q91VN6 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30,73■■■□□ 2,51
Ddx41Q91VN6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30,72■■■□□ 2,51
Ddx41Q91VN6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30,68■■■□□ 2,5
Ddx41Q91VN6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30,67■■■□□ 2,5
Ddx41Q91VN6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30,65■■■□□ 2,5
Ddx41Q91VN6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC30,62■■■□□ 2,49
Ddx41Q91VN6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30,59■■■□□ 2,49
Ddx41Q91VN6 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30,54■■■□□ 2,48
Ddx41Q91VN6 AL845457.1-201ENSMUST00000197244 68 ntBASIC30,53■■■□□ 2,48
Ddx41Q91VN6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC30,53■■■□□ 2,48
Ddx41Q91VN6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30,53■■■□□ 2,48
Ddx41Q91VN6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC30,52■■■□□ 2,48
Ddx41Q91VN6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC30,5■■■□□ 2,47
Ddx41Q91VN6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30,49■■■□□ 2,47
Ddx41Q91VN6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC30,48■■■□□ 2,47
Ddx41Q91VN6 AC166822.3-201ENSMUST00000227394 661 ntBASIC30,47■■■□□ 2,47
Ddx41Q91VN6 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30,46■■■□□ 2,47
Ddx41Q91VN6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30,43■■■□□ 2,46
Ddx41Q91VN6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30,43■■■□□ 2,46
Ddx41Q91VN6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30,39■■■□□ 2,45
Ddx41Q91VN6 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30,38■■■□□ 2,45
Ddx41Q91VN6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC30,37■■■□□ 2,45
Ddx41Q91VN6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30,36■■■□□ 2,45
Ddx41Q91VN6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30,36■■■□□ 2,45
Ddx41Q91VN6 Zfp131-207ENSMUST00000224946 1783 ntBASIC30,34■■■□□ 2,45
Ddx41Q91VN6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30,34■■■□□ 2,45
Ddx41Q91VN6 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC30,28■■■□□ 2,44
Ddx41Q91VN6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC30,28■■■□□ 2,44
Ddx41Q91VN6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC30,25■■■□□ 2,43
Ddx41Q91VN6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC30,24■■■□□ 2,43
Ddx41Q91VN6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30,23■■■□□ 2,43
Ddx41Q91VN6 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC30,22■■■□□ 2,43
Ddx41Q91VN6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC30,21■■■□□ 2,43
Ddx41Q91VN6 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30,2■■■□□ 2,43
Ddx41Q91VN6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC30,2■■■□□ 2,43
Ddx41Q91VN6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC30,19■■■□□ 2,42
Ddx41Q91VN6 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC30,18■■■□□ 2,42
Ddx41Q91VN6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC30,17■■■□□ 2,42
Ddx41Q91VN6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC30,16■■■□□ 2,42
Ddx41Q91VN6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30,13■■■□□ 2,41
Ddx41Q91VN6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC30,12■■■□□ 2,41
Ddx41Q91VN6 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30,11■■■□□ 2,41
Ddx41Q91VN6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30,1■■■□□ 2,41
Ddx41Q91VN6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30,09■■■□□ 2,41
Ddx41Q91VN6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30,08■■■□□ 2,41
Ddx41Q91VN6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC30,07■■■□□ 2,4
Ddx41Q91VN6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC30,07■■■□□ 2,4
Ddx41Q91VN6 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30,06■■■□□ 2,4
Ddx41Q91VN6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30,03■■■□□ 2,4
Ddx41Q91VN6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29,98■■■□□ 2,39
Ddx41Q91VN6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29,97■■■□□ 2,39
Ddx41Q91VN6 Zfp131-205ENSMUST00000223812 663 ntBASIC29,96■■■□□ 2,39
Ddx41Q91VN6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29,94■■■□□ 2,38
Retrieved 100 of 76,532 protein–RNA pairs in 13,5 ms