Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.07■■□□□ 1.76
Pcdh18Q8VHR0 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Pcdh18Q8VHR0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdh18Q8VHR0 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdh18Q8VHR0 Gm27325-201ENSMUST00000175467 74 ntBASIC26■■□□□ 1.75
Pcdh18Q8VHR0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
Pcdh18Q8VHR0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Pcdh18Q8VHR0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Pcdh18Q8VHR0 Gm25238-201ENSMUST00000174914 89 ntBASIC25.97■■□□□ 1.75
Pcdh18Q8VHR0 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC25.96■■□□□ 1.75
Pcdh18Q8VHR0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Pcdh18Q8VHR0 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC25.93■■□□□ 1.74
Pcdh18Q8VHR0 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Pcdh18Q8VHR0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Pcdh18Q8VHR0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Pcdh18Q8VHR0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdh18Q8VHR0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdh18Q8VHR0 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdh18Q8VHR0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Pcdh18Q8VHR0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdh18Q8VHR0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdh18Q8VHR0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
Pcdh18Q8VHR0 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.77■■□□□ 1.72
Pcdh18Q8VHR0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdh18Q8VHR0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdh18Q8VHR0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdh18Q8VHR0 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Pcdh18Q8VHR0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdh18Q8VHR0 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Pcdh18Q8VHR0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.7■■□□□ 1.7
Pcdh18Q8VHR0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdh18Q8VHR0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdh18Q8VHR0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.64■■□□□ 1.7
Pcdh18Q8VHR0 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdh18Q8VHR0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
Pcdh18Q8VHR0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Pcdh18Q8VHR0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
Pcdh18Q8VHR0 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Pcdh18Q8VHR0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdh18Q8VHR0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdh18Q8VHR0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdh18Q8VHR0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Pcdh18Q8VHR0 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
Pcdh18Q8VHR0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.49■■□□□ 1.67
Pcdh18Q8VHR0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
Pcdh18Q8VHR0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Pcdh18Q8VHR0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.43■■□□□ 1.66
Pcdh18Q8VHR0 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.42■■□□□ 1.66
Pcdh18Q8VHR0 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdh18Q8VHR0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Pcdh18Q8VHR0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Pcdh18Q8VHR0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Pcdh18Q8VHR0 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Pcdh18Q8VHR0 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC25.31■■□□□ 1.64
Pcdh18Q8VHR0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Pcdh18Q8VHR0 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.64
Pcdh18Q8VHR0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Pcdh18Q8VHR0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Pcdh18Q8VHR0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
Pcdh18Q8VHR0 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Pcdh18Q8VHR0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.2■■□□□ 1.62
Pcdh18Q8VHR0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.19■■□□□ 1.62
Pcdh18Q8VHR0 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Pcdh18Q8VHR0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh18Q8VHR0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Pcdh18Q8VHR0 Rab21-202ENSMUST00000218831 843 ntBASIC25.16■■□□□ 1.62
Pcdh18Q8VHR0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Pcdh18Q8VHR0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Pcdh18Q8VHR0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Pcdh18Q8VHR0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Pcdh18Q8VHR0 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.04■■□□□ 1.6
Pcdh18Q8VHR0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdh18Q8VHR0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdh18Q8VHR0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC25.03■■□□□ 1.6
Pcdh18Q8VHR0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Pcdh18Q8VHR0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25■■□□□ 1.59
Pcdh18Q8VHR0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Pcdh18Q8VHR0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Pcdh18Q8VHR0 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
Pcdh18Q8VHR0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Pcdh18Q8VHR0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdh18Q8VHR0 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Pcdh18Q8VHR0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Pcdh18Q8VHR0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.94■■□□□ 1.58
Pcdh18Q8VHR0 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.92■■□□□ 1.58
Pcdh18Q8VHR0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Pcdh18Q8VHR0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Pcdh18Q8VHR0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.9■■□□□ 1.58
Pcdh18Q8VHR0 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Pcdh18Q8VHR0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Pcdh18Q8VHR0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdh18Q8VHR0 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
Pcdh18Q8VHR0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.87■■□□□ 1.57
Pcdh18Q8VHR0 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.86■■□□□ 1.57
Pcdh18Q8VHR0 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh18Q8VHR0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Pcdh18Q8VHR0 Gm6206-201ENSMUST00000133472 2199 ntBASIC24.85■■□□□ 1.57
Pcdh18Q8VHR0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Pcdh18Q8VHR0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC24.83■■□□□ 1.57
Pcdh18Q8VHR0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms