Protein–RNA interactions for Protein: Q8VCI7

Swsap1, ATPase SWSAP1, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Swsap1Q8VCI7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Swsap1Q8VCI7 Gm26115-201ENSMUST00000175605 87 ntBASIC24.59■■□□□ 1.53
Swsap1Q8VCI7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.59■■□□□ 1.53
Swsap1Q8VCI7 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Swsap1Q8VCI7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Swsap1Q8VCI7 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Swsap1Q8VCI7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Swsap1Q8VCI7 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Swsap1Q8VCI7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Swsap1Q8VCI7 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.47■■□□□ 1.51
Swsap1Q8VCI7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Swsap1Q8VCI7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Swsap1Q8VCI7 Gm8109-201ENSMUST00000194076 746 ntBASIC24.44■■□□□ 1.5
Swsap1Q8VCI7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC24.43■■□□□ 1.5
Swsap1Q8VCI7 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Swsap1Q8VCI7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.42■■□□□ 1.5
Swsap1Q8VCI7 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Swsap1Q8VCI7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Swsap1Q8VCI7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Swsap1Q8VCI7 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Swsap1Q8VCI7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.33■■□□□ 1.49
Swsap1Q8VCI7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Swsap1Q8VCI7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
Swsap1Q8VCI7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.31■■□□□ 1.48
Swsap1Q8VCI7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
Swsap1Q8VCI7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Swsap1Q8VCI7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.28■■□□□ 1.48
Swsap1Q8VCI7 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Swsap1Q8VCI7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Swsap1Q8VCI7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Swsap1Q8VCI7 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Swsap1Q8VCI7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Swsap1Q8VCI7 Gm17082-201ENSMUST00000166043 1091 ntBASIC24.14■■□□□ 1.45
Swsap1Q8VCI7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
Swsap1Q8VCI7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Swsap1Q8VCI7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.05■■□□□ 1.44
Swsap1Q8VCI7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Swsap1Q8VCI7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Swsap1Q8VCI7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Swsap1Q8VCI7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
Swsap1Q8VCI7 Gm27322-201ENSMUST00000184007 104 ntBASIC24.01■■□□□ 1.43
Swsap1Q8VCI7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
Swsap1Q8VCI7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
Swsap1Q8VCI7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Swsap1Q8VCI7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC23.93■■□□□ 1.42
Swsap1Q8VCI7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Swsap1Q8VCI7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Swsap1Q8VCI7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Swsap1Q8VCI7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Swsap1Q8VCI7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Swsap1Q8VCI7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Swsap1Q8VCI7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Swsap1Q8VCI7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Swsap1Q8VCI7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Swsap1Q8VCI7 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.78■■□□□ 1.4
Swsap1Q8VCI7 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC23.77■■□□□ 1.39
Swsap1Q8VCI7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC23.75■■□□□ 1.39
Swsap1Q8VCI7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.73■■□□□ 1.39
Swsap1Q8VCI7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Swsap1Q8VCI7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Swsap1Q8VCI7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Swsap1Q8VCI7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Swsap1Q8VCI7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Swsap1Q8VCI7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.68■■□□□ 1.38
Swsap1Q8VCI7 Gm24804-201ENSMUST00000174982 85 ntBASIC23.67■■□□□ 1.38
Swsap1Q8VCI7 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.67■■□□□ 1.38
Swsap1Q8VCI7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Swsap1Q8VCI7 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Swsap1Q8VCI7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.63■■□□□ 1.37
Swsap1Q8VCI7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Swsap1Q8VCI7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Swsap1Q8VCI7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Swsap1Q8VCI7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Swsap1Q8VCI7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
Swsap1Q8VCI7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
Swsap1Q8VCI7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Swsap1Q8VCI7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Swsap1Q8VCI7 AC166822.3-201ENSMUST00000227394 661 ntBASIC23.52■■□□□ 1.36
Swsap1Q8VCI7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Swsap1Q8VCI7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Swsap1Q8VCI7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC23.5■■□□□ 1.35
Swsap1Q8VCI7 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.35
Swsap1Q8VCI7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Swsap1Q8VCI7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Swsap1Q8VCI7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Swsap1Q8VCI7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Swsap1Q8VCI7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Swsap1Q8VCI7 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Swsap1Q8VCI7 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Swsap1Q8VCI7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Swsap1Q8VCI7 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Swsap1Q8VCI7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Swsap1Q8VCI7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
Swsap1Q8VCI7 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Swsap1Q8VCI7 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Swsap1Q8VCI7 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Swsap1Q8VCI7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Swsap1Q8VCI7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Swsap1Q8VCI7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Swsap1Q8VCI7 Mipep-204ENSMUST00000225043 1548 ntBASIC23.28■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms