Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Ushbp1Q8R370 Gm8109-201ENSMUST00000194076 746 ntBASIC31.19■■■□□ 2.58
Ushbp1Q8R370 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
Ushbp1Q8R370 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ushbp1Q8R370 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Ushbp1Q8R370 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
Ushbp1Q8R370 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
Ushbp1Q8R370 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Ushbp1Q8R370 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Ushbp1Q8R370 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
Ushbp1Q8R370 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Ushbp1Q8R370 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31■■■□□ 2.55
Ushbp1Q8R370 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
Ushbp1Q8R370 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ushbp1Q8R370 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
Ushbp1Q8R370 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.97■■■□□ 2.55
Ushbp1Q8R370 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
Ushbp1Q8R370 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
Ushbp1Q8R370 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.83■■■□□ 2.53
Ushbp1Q8R370 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Ushbp1Q8R370 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Ushbp1Q8R370 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
Ushbp1Q8R370 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.76■■■□□ 2.51
Ushbp1Q8R370 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ushbp1Q8R370 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ushbp1Q8R370 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ushbp1Q8R370 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ushbp1Q8R370 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Ushbp1Q8R370 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.64■■■□□ 2.5
Ushbp1Q8R370 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.57■■■□□ 2.49
Ushbp1Q8R370 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Ushbp1Q8R370 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ushbp1Q8R370 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ushbp1Q8R370 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30.48■■■□□ 2.47
Ushbp1Q8R370 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Ushbp1Q8R370 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
Ushbp1Q8R370 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
Ushbp1Q8R370 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30.37■■■□□ 2.45
Ushbp1Q8R370 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30.34■■■□□ 2.45
Ushbp1Q8R370 Gm17082-201ENSMUST00000166043 1091 ntBASIC30.34■■■□□ 2.45
Ushbp1Q8R370 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Ushbp1Q8R370 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ushbp1Q8R370 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ushbp1Q8R370 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30.26■■■□□ 2.43
Ushbp1Q8R370 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Ushbp1Q8R370 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Ushbp1Q8R370 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.21■■■□□ 2.43
Ushbp1Q8R370 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.2■■■□□ 2.43
Ushbp1Q8R370 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
Ushbp1Q8R370 Zfp131-207ENSMUST00000224946 1783 ntBASIC30.17■■■□□ 2.42
Ushbp1Q8R370 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30.15■■■□□ 2.42
Ushbp1Q8R370 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
Ushbp1Q8R370 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Ushbp1Q8R370 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.14■■■□□ 2.41
Ushbp1Q8R370 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30.13■■■□□ 2.41
Ushbp1Q8R370 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Ushbp1Q8R370 Gm24804-201ENSMUST00000174982 85 ntBASIC30.13■■■□□ 2.41
Ushbp1Q8R370 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ushbp1Q8R370 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Ushbp1Q8R370 Gm27322-201ENSMUST00000184007 104 ntBASIC30.08■■■□□ 2.41
Ushbp1Q8R370 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ushbp1Q8R370 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Ushbp1Q8R370 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ushbp1Q8R370 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ushbp1Q8R370 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ushbp1Q8R370 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30■■■□□ 2.39
Ushbp1Q8R370 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ushbp1Q8R370 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ushbp1Q8R370 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.39
Ushbp1Q8R370 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29.9■■■□□ 2.38
Ushbp1Q8R370 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.9■■■□□ 2.38
Ushbp1Q8R370 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Ushbp1Q8R370 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Ushbp1Q8R370 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Ushbp1Q8R370 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29.83■■■□□ 2.37
Ushbp1Q8R370 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ushbp1Q8R370 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
Ushbp1Q8R370 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.77■■■□□ 2.36
Ushbp1Q8R370 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
Ushbp1Q8R370 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Ushbp1Q8R370 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Ushbp1Q8R370 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.68■■■□□ 2.34
Ushbp1Q8R370 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Ushbp1Q8R370 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
Ushbp1Q8R370 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.64■■■□□ 2.34
Ushbp1Q8R370 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
Ushbp1Q8R370 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Ushbp1Q8R370 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ushbp1Q8R370 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ushbp1Q8R370 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ushbp1Q8R370 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.54■■■□□ 2.32
Ushbp1Q8R370 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.53■■■□□ 2.32
Ushbp1Q8R370 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.52■■■□□ 2.32
Ushbp1Q8R370 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Ushbp1Q8R370 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Ushbp1Q8R370 Zfp131-205ENSMUST00000223812 663 ntBASIC29.49■■■□□ 2.31
Ushbp1Q8R370 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
Ushbp1Q8R370 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
Ushbp1Q8R370 Gm2415-204ENSMUST00000190235 2004 ntBASIC29.47■■■□□ 2.31
Ushbp1Q8R370 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms