Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31,21■■■□□ 2,59
Ushbp1Q8R370 Gm8109-201ENSMUST00000194076 746 ntBASIC31,19■■■□□ 2,58
Ushbp1Q8R370 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31,18■■■□□ 2,58
Ushbp1Q8R370 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31,15■■■□□ 2,58
Ushbp1Q8R370 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31,15■■■□□ 2,58
Ushbp1Q8R370 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31,14■■■□□ 2,58
Ushbp1Q8R370 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC31,08■■■□□ 2,57
Ushbp1Q8R370 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31,08■■■□□ 2,57
Ushbp1Q8R370 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC31,03■■■□□ 2,56
Ushbp1Q8R370 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2,55
Ushbp1Q8R370 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2,55
Ushbp1Q8R370 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC31■■■□□ 2,55
Ushbp1Q8R370 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30,98■■■□□ 2,55
Ushbp1Q8R370 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC30,98■■■□□ 2,55
Ushbp1Q8R370 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30,98■■■□□ 2,55
Ushbp1Q8R370 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30,97■■■□□ 2,55
Ushbp1Q8R370 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC30,93■■■□□ 2,54
Ushbp1Q8R370 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30,9■■■□□ 2,54
Ushbp1Q8R370 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30,83■■■□□ 2,53
Ushbp1Q8R370 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30,82■■■□□ 2,52
Ushbp1Q8R370 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC30,77■■■□□ 2,52
Ushbp1Q8R370 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30,76■■■□□ 2,52
Ushbp1Q8R370 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30,76■■■□□ 2,51
Ushbp1Q8R370 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC30,72■■■□□ 2,51
Ushbp1Q8R370 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30,69■■■□□ 2,5
Ushbp1Q8R370 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30,69■■■□□ 2,5
Ushbp1Q8R370 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30,69■■■□□ 2,5
Ushbp1Q8R370 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC30,66■■■□□ 2,5
Ushbp1Q8R370 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30,64■■■□□ 2,5
Ushbp1Q8R370 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30,57■■■□□ 2,49
Ushbp1Q8R370 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30,57■■■□□ 2,48
Ushbp1Q8R370 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC30,5■■■□□ 2,47
Ushbp1Q8R370 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30,49■■■□□ 2,47
Ushbp1Q8R370 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC30,48■■■□□ 2,47
Ushbp1Q8R370 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC30,45■■■□□ 2,47
Ushbp1Q8R370 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC30,44■■■□□ 2,46
Ushbp1Q8R370 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC30,39■■■□□ 2,46
Ushbp1Q8R370 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC30,37■■■□□ 2,45
Ushbp1Q8R370 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC30,34■■■□□ 2,45
Ushbp1Q8R370 Gm17082-201ENSMUST00000166043 1091 ntBASIC30,34■■■□□ 2,45
Ushbp1Q8R370 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC30,32■■■□□ 2,44
Ushbp1Q8R370 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30,29■■■□□ 2,44
Ushbp1Q8R370 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC30,28■■■□□ 2,44
Ushbp1Q8R370 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC30,26■■■□□ 2,43
Ushbp1Q8R370 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC30,24■■■□□ 2,43
Ushbp1Q8R370 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30,21■■■□□ 2,43
Ushbp1Q8R370 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30,21■■■□□ 2,43
Ushbp1Q8R370 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30,2■■■□□ 2,43
Ushbp1Q8R370 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30,19■■■□□ 2,42
Ushbp1Q8R370 Zfp131-207ENSMUST00000224946 1783 ntBASIC30,17■■■□□ 2,42
Ushbp1Q8R370 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC30,15■■■□□ 2,42
Ushbp1Q8R370 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30,14■■■□□ 2,42
Ushbp1Q8R370 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC30,14■■■□□ 2,41
Ushbp1Q8R370 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30,14■■■□□ 2,41
Ushbp1Q8R370 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC30,13■■■□□ 2,41
Ushbp1Q8R370 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30,13■■■□□ 2,41
Ushbp1Q8R370 Gm24804-201ENSMUST00000174982 85 ntBASIC30,13■■■□□ 2,41
Ushbp1Q8R370 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC30,09■■■□□ 2,41
Ushbp1Q8R370 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30,09■■■□□ 2,41
Ushbp1Q8R370 Gm27322-201ENSMUST00000184007 104 ntBASIC30,08■■■□□ 2,41
Ushbp1Q8R370 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30,07■■■□□ 2,4
Ushbp1Q8R370 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC30,06■■■□□ 2,4
Ushbp1Q8R370 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC30,06■■■□□ 2,4
Ushbp1Q8R370 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC30,03■■■□□ 2,4
Ushbp1Q8R370 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2,39
Ushbp1Q8R370 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC30■■■□□ 2,39
Ushbp1Q8R370 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29,97■■■□□ 2,39
Ushbp1Q8R370 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29,96■■■□□ 2,39
Ushbp1Q8R370 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29,95■■■□□ 2,39
Ushbp1Q8R370 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC29,9■■■□□ 2,38
Ushbp1Q8R370 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29,9■■■□□ 2,38
Ushbp1Q8R370 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29,9■■■□□ 2,38
Ushbp1Q8R370 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29,85■■■□□ 2,37
Ushbp1Q8R370 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC29,84■■■□□ 2,37
Ushbp1Q8R370 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC29,83■■■□□ 2,37
Ushbp1Q8R370 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC29,78■■■□□ 2,36
Ushbp1Q8R370 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29,78■■■□□ 2,36
Ushbp1Q8R370 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29,77■■■□□ 2,36
Ushbp1Q8R370 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29,76■■■□□ 2,35
Ushbp1Q8R370 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29,74■■■□□ 2,35
Ushbp1Q8R370 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC29,73■■■□□ 2,35
Ushbp1Q8R370 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29,68■■■□□ 2,34
Ushbp1Q8R370 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC29,66■■■□□ 2,34
Ushbp1Q8R370 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC29,64■■■□□ 2,34
Ushbp1Q8R370 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29,64■■■□□ 2,34
Ushbp1Q8R370 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC29,63■■■□□ 2,33
Ushbp1Q8R370 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29,62■■■□□ 2,33
Ushbp1Q8R370 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC29,6■■■□□ 2,33
Ushbp1Q8R370 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Ushbp1Q8R370 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC29,6■■■□□ 2,33
Ushbp1Q8R370 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29,54■■■□□ 2,32
Ushbp1Q8R370 AL845457.1-201ENSMUST00000197244 68 ntBASIC29,53■■■□□ 2,32
Ushbp1Q8R370 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29,52■■■□□ 2,32
Ushbp1Q8R370 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29,5■■■□□ 2,31
Ushbp1Q8R370 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC29,49■■■□□ 2,31
Ushbp1Q8R370 Zfp131-205ENSMUST00000223812 663 ntBASIC29,49■■■□□ 2,31
Ushbp1Q8R370 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC29,48■■■□□ 2,31
Ushbp1Q8R370 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC29,47■■■□□ 2,31
Ushbp1Q8R370 Gm2415-204ENSMUST00000190235 2004 ntBASIC29,47■■■□□ 2,31
Ushbp1Q8R370 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC29,46■■■□□ 2,31
Retrieved 100 of 76,532 protein–RNA pairs in 12,3 ms