Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Rfc3Q8R323 Gm8109-201ENSMUST00000194076 746 ntBASIC25.48■■□□□ 1.67
Rfc3Q8R323 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
Rfc3Q8R323 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Rfc3Q8R323 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Rfc3Q8R323 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Rfc3Q8R323 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.38■■□□□ 1.65
Rfc3Q8R323 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.38■■□□□ 1.65
Rfc3Q8R323 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.37■■□□□ 1.65
Rfc3Q8R323 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.35■■□□□ 1.65
Rfc3Q8R323 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Rfc3Q8R323 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.29■■□□□ 1.64
Rfc3Q8R323 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Rfc3Q8R323 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Rfc3Q8R323 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Rfc3Q8R323 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Rfc3Q8R323 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Rfc3Q8R323 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.11■■□□□ 1.61
Rfc3Q8R323 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Rfc3Q8R323 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Rfc3Q8R323 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.09■■□□□ 1.61
Rfc3Q8R323 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.05■■□□□ 1.6
Rfc3Q8R323 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Rfc3Q8R323 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Rfc3Q8R323 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.01■■□□□ 1.59
Rfc3Q8R323 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Rfc3Q8R323 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Rfc3Q8R323 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Rfc3Q8R323 Gm27322-201ENSMUST00000184007 104 ntBASIC24.96■■□□□ 1.59
Rfc3Q8R323 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
Rfc3Q8R323 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rfc3Q8R323 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Rfc3Q8R323 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC24.92■■□□□ 1.58
Rfc3Q8R323 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Rfc3Q8R323 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.57
Rfc3Q8R323 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.57
Rfc3Q8R323 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rfc3Q8R323 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Rfc3Q8R323 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
Rfc3Q8R323 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.74■■□□□ 1.55
Rfc3Q8R323 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.72■■□□□ 1.55
Rfc3Q8R323 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.69■■□□□ 1.54
Rfc3Q8R323 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC24.68■■□□□ 1.54
Rfc3Q8R323 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Rfc3Q8R323 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.64■■□□□ 1.54
Rfc3Q8R323 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rfc3Q8R323 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Rfc3Q8R323 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.62■■□□□ 1.53
Rfc3Q8R323 Gm24804-201ENSMUST00000174982 85 ntBASIC24.62■■□□□ 1.53
Rfc3Q8R323 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Rfc3Q8R323 AL845457.1-201ENSMUST00000197244 68 ntBASIC24.59■■□□□ 1.53
Rfc3Q8R323 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
Rfc3Q8R323 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc3Q8R323 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc3Q8R323 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc3Q8R323 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rfc3Q8R323 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rfc3Q8R323 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rfc3Q8R323 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.52■■□□□ 1.52
Rfc3Q8R323 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.47■■□□□ 1.51
Rfc3Q8R323 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.46■■□□□ 1.51
Rfc3Q8R323 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.45■■□□□ 1.5
Rfc3Q8R323 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Rfc3Q8R323 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
Rfc3Q8R323 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
Rfc3Q8R323 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
Rfc3Q8R323 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Rfc3Q8R323 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Rfc3Q8R323 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.37■■□□□ 1.49
Rfc3Q8R323 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Rfc3Q8R323 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
Rfc3Q8R323 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.31■■□□□ 1.48
Rfc3Q8R323 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Rfc3Q8R323 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Rfc3Q8R323 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
Rfc3Q8R323 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Rfc3Q8R323 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24.24■■□□□ 1.47
Rfc3Q8R323 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Rfc3Q8R323 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Rfc3Q8R323 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc3Q8R323 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Rfc3Q8R323 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rfc3Q8R323 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Rfc3Q8R323 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Rfc3Q8R323 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Rfc3Q8R323 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Rfc3Q8R323 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Rfc3Q8R323 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.12■■□□□ 1.45
Rfc3Q8R323 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Rfc3Q8R323 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
Rfc3Q8R323 Mipep-204ENSMUST00000225043 1548 ntBASIC24.06■■□□□ 1.44
Rfc3Q8R323 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Rfc3Q8R323 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Rfc3Q8R323 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Rfc3Q8R323 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.01■■□□□ 1.43
Rfc3Q8R323 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Rfc3Q8R323 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Rfc3Q8R323 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.99■■□□□ 1.43
Rfc3Q8R323 Zfp131-205ENSMUST00000223812 663 ntBASIC23.99■■□□□ 1.43
Rfc3Q8R323 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms