Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC32.23■■■□□ 2.75
Gtf3c5Q8R2T8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Gtf3c5Q8R2T8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
Gtf3c5Q8R2T8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Gtf3c5Q8R2T8 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Gtf3c5Q8R2T8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Gtf3c5Q8R2T8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.17■■■□□ 2.74
Gtf3c5Q8R2T8 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.16■■■□□ 2.74
Gtf3c5Q8R2T8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.15■■■□□ 2.74
Gtf3c5Q8R2T8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Gtf3c5Q8R2T8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
Gtf3c5Q8R2T8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.04■■■□□ 2.72
Gtf3c5Q8R2T8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Gtf3c5Q8R2T8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.03■■■□□ 2.72
Gtf3c5Q8R2T8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.02■■■□□ 2.72
Gtf3c5Q8R2T8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC31.88■■■□□ 2.69
Gtf3c5Q8R2T8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.84■■■□□ 2.69
Gtf3c5Q8R2T8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Gtf3c5Q8R2T8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Gtf3c5Q8R2T8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Gtf3c5Q8R2T8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Gtf3c5Q8R2T8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.78■■■□□ 2.68
Gtf3c5Q8R2T8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
Gtf3c5Q8R2T8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
Gtf3c5Q8R2T8 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC31.71■■■□□ 2.67
Gtf3c5Q8R2T8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Gtf3c5Q8R2T8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Gtf3c5Q8R2T8 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC31.66■■■□□ 2.66
Gtf3c5Q8R2T8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Gtf3c5Q8R2T8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
Gtf3c5Q8R2T8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Gtf3c5Q8R2T8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Gtf3c5Q8R2T8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Gtf3c5Q8R2T8 Gm26115-201ENSMUST00000175605 87 ntBASIC31.57■■■□□ 2.64
Gtf3c5Q8R2T8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
Gtf3c5Q8R2T8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.55■■■□□ 2.64
Gtf3c5Q8R2T8 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC31.54■■■□□ 2.64
Gtf3c5Q8R2T8 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Gtf3c5Q8R2T8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Gtf3c5Q8R2T8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Gtf3c5Q8R2T8 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Gtf3c5Q8R2T8 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.48■■■□□ 2.63
Gtf3c5Q8R2T8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Gtf3c5Q8R2T8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.44■■■□□ 2.62
Gtf3c5Q8R2T8 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.43■■■□□ 2.62
Gtf3c5Q8R2T8 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.41■■■□□ 2.62
Gtf3c5Q8R2T8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.4■■■□□ 2.62
Gtf3c5Q8R2T8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Gtf3c5Q8R2T8 Gm27322-201ENSMUST00000184007 104 ntBASIC31.33■■■□□ 2.61
Gtf3c5Q8R2T8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Gtf3c5Q8R2T8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.32■■■□□ 2.6
Gtf3c5Q8R2T8 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Gtf3c5Q8R2T8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.31■■■□□ 2.6
Gtf3c5Q8R2T8 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Gtf3c5Q8R2T8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.3■■■□□ 2.6
Gtf3c5Q8R2T8 Gm8109-201ENSMUST00000194076 746 ntBASIC31.29■■■□□ 2.6
Gtf3c5Q8R2T8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Gtf3c5Q8R2T8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.27■■■□□ 2.6
Gtf3c5Q8R2T8 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Gtf3c5Q8R2T8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Gtf3c5Q8R2T8 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.2■■■□□ 2.59
Gtf3c5Q8R2T8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Gtf3c5Q8R2T8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Gtf3c5Q8R2T8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Gtf3c5Q8R2T8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Gtf3c5Q8R2T8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Gtf3c5Q8R2T8 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
Gtf3c5Q8R2T8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Gtf3c5Q8R2T8 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.03■■■□□ 2.56
Gtf3c5Q8R2T8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Gtf3c5Q8R2T8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31■■■□□ 2.55
Gtf3c5Q8R2T8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
Gtf3c5Q8R2T8 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Gtf3c5Q8R2T8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Gtf3c5Q8R2T8 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Gtf3c5Q8R2T8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Gtf3c5Q8R2T8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Gtf3c5Q8R2T8 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Gtf3c5Q8R2T8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC30.84■■■□□ 2.53
Gtf3c5Q8R2T8 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Gtf3c5Q8R2T8 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Gtf3c5Q8R2T8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Gtf3c5Q8R2T8 Mipep-204ENSMUST00000225043 1548 ntBASIC30.75■■■□□ 2.51
Gtf3c5Q8R2T8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Gtf3c5Q8R2T8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Gtf3c5Q8R2T8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Gtf3c5Q8R2T8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Gtf3c5Q8R2T8 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.5
Gtf3c5Q8R2T8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Gtf3c5Q8R2T8 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
Gtf3c5Q8R2T8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.64■■■□□ 2.5
Gtf3c5Q8R2T8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Gtf3c5Q8R2T8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Gtf3c5Q8R2T8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Gtf3c5Q8R2T8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Gtf3c5Q8R2T8 Zxda-201ENSMUST00000117281 2621 ntBASIC30.6■■■□□ 2.49
Gtf3c5Q8R2T8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
Gtf3c5Q8R2T8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Gtf3c5Q8R2T8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.55■■■□□ 2.48
Gtf3c5Q8R2T8 Gm24804-201ENSMUST00000174982 85 ntBASIC30.55■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms