Protein–RNA interactions for Protein: Q8R1Z4

Ppp1r42, Protein phosphatase 1 regulatory subunit 42, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp1r42Q8R1Z4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC34,62■■■■□ 3,13
Ppp1r42Q8R1Z4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC34,61■■■■□ 3,13
Ppp1r42Q8R1Z4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC34,58■■■■□ 3,13
Ppp1r42Q8R1Z4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC34,55■■■■□ 3,12
Ppp1r42Q8R1Z4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC34,53■■■■□ 3,12
Ppp1r42Q8R1Z4 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC34,49■■■■□ 3,11
Ppp1r42Q8R1Z4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC34,46■■■■□ 3,11
Ppp1r42Q8R1Z4 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC34,44■■■■□ 3,1
Ppp1r42Q8R1Z4 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC34,44■■■■□ 3,1
Ppp1r42Q8R1Z4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC34,42■■■■□ 3,1
Ppp1r42Q8R1Z4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC34,39■■■■□ 3,1
Ppp1r42Q8R1Z4 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC34,37■■■■□ 3,09
Ppp1r42Q8R1Z4 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC34,35■■■■□ 3,09
Ppp1r42Q8R1Z4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC34,32■■■■□ 3,08
Ppp1r42Q8R1Z4 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC34,29■■■■□ 3,08
Ppp1r42Q8R1Z4 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC34,29■■■■□ 3,08
Ppp1r42Q8R1Z4 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC34,24■■■■□ 3,07
Ppp1r42Q8R1Z4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC34,23■■■■□ 3,07
Ppp1r42Q8R1Z4 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC34,2■■■■□ 3,06
Ppp1r42Q8R1Z4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC34,11■■■■□ 3,05
Ppp1r42Q8R1Z4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC34,08■■■■□ 3,05
Ppp1r42Q8R1Z4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC34,06■■■■□ 3,04
Ppp1r42Q8R1Z4 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC34,05■■■■□ 3,04
Ppp1r42Q8R1Z4 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC34,03■■■■□ 3,04
Ppp1r42Q8R1Z4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC34,01■■■■□ 3,03
Ppp1r42Q8R1Z4 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC34,01■■■■□ 3,03
Ppp1r42Q8R1Z4 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC34■■■■□ 3,03
Ppp1r42Q8R1Z4 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC33,97■■■■□ 3,03
Ppp1r42Q8R1Z4 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC33,88■■■■□ 3,01
Ppp1r42Q8R1Z4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33,88■■■■□ 3,01
Ppp1r42Q8R1Z4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC33,87■■■■□ 3,01
Ppp1r42Q8R1Z4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC33,86■■■■□ 3,01
Ppp1r42Q8R1Z4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC33,84■■■■□ 3,01
Ppp1r42Q8R1Z4 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC33,84■■■■□ 3,01
Ppp1r42Q8R1Z4 Zfp131-207ENSMUST00000224946 1783 ntBASIC33,83■■■■□ 3,01
Ppp1r42Q8R1Z4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC33,79■■■■□ 3
Ppp1r42Q8R1Z4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC33,79■■■■□ 3
Ppp1r42Q8R1Z4 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC33,76■■■□□ 2,99
Ppp1r42Q8R1Z4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC33,73■■■□□ 2,99
Ppp1r42Q8R1Z4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC33,71■■■□□ 2,99
Ppp1r42Q8R1Z4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC33,7■■■□□ 2,99
Ppp1r42Q8R1Z4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC33,7■■■□□ 2,99
Ppp1r42Q8R1Z4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC33,65■■■□□ 2,98
Ppp1r42Q8R1Z4 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC33,62■■■□□ 2,97
Ppp1r42Q8R1Z4 Gm17082-201ENSMUST00000166043 1091 ntBASIC33,59■■■□□ 2,97
Ppp1r42Q8R1Z4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC33,59■■■□□ 2,97
Ppp1r42Q8R1Z4 Gm26115-201ENSMUST00000175605 87 ntBASIC33,58■■■□□ 2,97
Ppp1r42Q8R1Z4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC33,57■■■□□ 2,96
Ppp1r42Q8R1Z4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC33,55■■■□□ 2,96
Ppp1r42Q8R1Z4 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC33,55■■■□□ 2,96
Ppp1r42Q8R1Z4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC33,54■■■□□ 2,96
Ppp1r42Q8R1Z4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC33,53■■■□□ 2,96
Ppp1r42Q8R1Z4 Gm8109-201ENSMUST00000194076 746 ntBASIC33,52■■■□□ 2,96
Ppp1r42Q8R1Z4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC33,5■■■□□ 2,95
Ppp1r42Q8R1Z4 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC33,49■■■□□ 2,95
Ppp1r42Q8R1Z4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC33,48■■■□□ 2,95
Ppp1r42Q8R1Z4 AL845457.1-201ENSMUST00000197244 68 ntBASIC33,46■■■□□ 2,95
Ppp1r42Q8R1Z4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC33,45■■■□□ 2,95
Ppp1r42Q8R1Z4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC33,43■■■□□ 2,94
Ppp1r42Q8R1Z4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC33,42■■■□□ 2,94
Ppp1r42Q8R1Z4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC33,4■■■□□ 2,94
Ppp1r42Q8R1Z4 Gm27322-201ENSMUST00000184007 104 ntBASIC33,39■■■□□ 2,94
Ppp1r42Q8R1Z4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC33,37■■■□□ 2,93
Ppp1r42Q8R1Z4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC33,36■■■□□ 2,93
Ppp1r42Q8R1Z4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC33,34■■■□□ 2,93
Ppp1r42Q8R1Z4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC33,33■■■□□ 2,93
Ppp1r42Q8R1Z4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC33,29■■■□□ 2,92
Ppp1r42Q8R1Z4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC33,25■■■□□ 2,91
Ppp1r42Q8R1Z4 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC33,25■■■□□ 2,91
Ppp1r42Q8R1Z4 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC33,23■■■□□ 2,91
Ppp1r42Q8R1Z4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC33,2■■■□□ 2,91
Ppp1r42Q8R1Z4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC33,18■■■□□ 2,9
Ppp1r42Q8R1Z4 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC33,17■■■□□ 2,9
Ppp1r42Q8R1Z4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC33,15■■■□□ 2,9
Ppp1r42Q8R1Z4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC33,14■■■□□ 2,9
Ppp1r42Q8R1Z4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC33,11■■■□□ 2,89
Ppp1r42Q8R1Z4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC33,07■■■□□ 2,88
Ppp1r42Q8R1Z4 AC166822.3-201ENSMUST00000227394 661 ntBASIC33,05■■■□□ 2,88
Ppp1r42Q8R1Z4 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC33,04■■■□□ 2,88
Ppp1r42Q8R1Z4 Mipep-204ENSMUST00000225043 1548 ntBASIC33,02■■■□□ 2,88
Ppp1r42Q8R1Z4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC33,02■■■□□ 2,88
Ppp1r42Q8R1Z4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC33■■■□□ 2,87
Ppp1r42Q8R1Z4 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC32,99■■■□□ 2,87
Ppp1r42Q8R1Z4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC32,92■■■□□ 2,86
Ppp1r42Q8R1Z4 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC32,91■■■□□ 2,86
Ppp1r42Q8R1Z4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC32,88■■■□□ 2,85
Ppp1r42Q8R1Z4 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32,86■■■□□ 2,85
Ppp1r42Q8R1Z4 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC32,85■■■□□ 2,85
Ppp1r42Q8R1Z4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC32,84■■■□□ 2,85
Ppp1r42Q8R1Z4 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC32,83■■■□□ 2,85
Ppp1r42Q8R1Z4 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC32,82■■■□□ 2,85
Ppp1r42Q8R1Z4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC32,82■■■□□ 2,84
Ppp1r42Q8R1Z4 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC32,81■■■□□ 2,84
Ppp1r42Q8R1Z4 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC32,77■■■□□ 2,84
Ppp1r42Q8R1Z4 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC32,77■■■□□ 2,84
Ppp1r42Q8R1Z4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC32,77■■■□□ 2,84
Ppp1r42Q8R1Z4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC32,74■■■□□ 2,83
Ppp1r42Q8R1Z4 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC32,73■■■□□ 2,83
Ppp1r42Q8R1Z4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC32,71■■■□□ 2,83
Ppp1r42Q8R1Z4 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC32,69■■■□□ 2,82
Retrieved 100 of 76,532 protein–RNA pairs in 11,7 ms