Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
H2afjQ8R1M2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
H2afjQ8R1M2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
H2afjQ8R1M2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.15■■□□□ 1.62
H2afjQ8R1M2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
H2afjQ8R1M2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
H2afjQ8R1M2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
H2afjQ8R1M2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
H2afjQ8R1M2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
H2afjQ8R1M2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
H2afjQ8R1M2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.03■■□□□ 1.6
H2afjQ8R1M2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
H2afjQ8R1M2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC25.01■■□□□ 1.59
H2afjQ8R1M2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.97■■□□□ 1.59
H2afjQ8R1M2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC24.93■■□□□ 1.58
H2afjQ8R1M2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
H2afjQ8R1M2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
H2afjQ8R1M2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
H2afjQ8R1M2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
H2afjQ8R1M2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.9■■□□□ 1.58
H2afjQ8R1M2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.9■■□□□ 1.58
H2afjQ8R1M2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.9■■□□□ 1.58
H2afjQ8R1M2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
H2afjQ8R1M2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
H2afjQ8R1M2 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC24.85■■□□□ 1.57
H2afjQ8R1M2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.82■■□□□ 1.56
H2afjQ8R1M2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
H2afjQ8R1M2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
H2afjQ8R1M2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.8■■□□□ 1.56
H2afjQ8R1M2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
H2afjQ8R1M2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
H2afjQ8R1M2 Rab21-202ENSMUST00000218831 843 ntBASIC24.74■■□□□ 1.55
H2afjQ8R1M2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.73■■□□□ 1.55
H2afjQ8R1M2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
H2afjQ8R1M2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
H2afjQ8R1M2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.66■■□□□ 1.54
H2afjQ8R1M2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
H2afjQ8R1M2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
H2afjQ8R1M2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
H2afjQ8R1M2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
H2afjQ8R1M2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.6■■□□□ 1.53
H2afjQ8R1M2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
H2afjQ8R1M2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
H2afjQ8R1M2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
H2afjQ8R1M2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.52■■□□□ 1.52
H2afjQ8R1M2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.49■■□□□ 1.51
H2afjQ8R1M2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
H2afjQ8R1M2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
H2afjQ8R1M2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
H2afjQ8R1M2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
H2afjQ8R1M2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
H2afjQ8R1M2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.42■■□□□ 1.5
H2afjQ8R1M2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
H2afjQ8R1M2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
H2afjQ8R1M2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
H2afjQ8R1M2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
H2afjQ8R1M2 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.37■■□□□ 1.49
H2afjQ8R1M2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
H2afjQ8R1M2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.36■■□□□ 1.49
H2afjQ8R1M2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.35■■□□□ 1.49
H2afjQ8R1M2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.35■■□□□ 1.49
H2afjQ8R1M2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
H2afjQ8R1M2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
H2afjQ8R1M2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
H2afjQ8R1M2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.28■■□□□ 1.48
H2afjQ8R1M2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.28■■□□□ 1.48
H2afjQ8R1M2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
H2afjQ8R1M2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
H2afjQ8R1M2 Gm25262-201ENSMUST00000174934 133 ntBASIC24.25■■□□□ 1.47
H2afjQ8R1M2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
H2afjQ8R1M2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
H2afjQ8R1M2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
H2afjQ8R1M2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
H2afjQ8R1M2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
H2afjQ8R1M2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.19■■□□□ 1.46
H2afjQ8R1M2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
H2afjQ8R1M2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
H2afjQ8R1M2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
H2afjQ8R1M2 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.13■■□□□ 1.45
H2afjQ8R1M2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
H2afjQ8R1M2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
H2afjQ8R1M2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
H2afjQ8R1M2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
H2afjQ8R1M2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
H2afjQ8R1M2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
H2afjQ8R1M2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
H2afjQ8R1M2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
H2afjQ8R1M2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
H2afjQ8R1M2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
H2afjQ8R1M2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.91■■□□□ 1.42
H2afjQ8R1M2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
H2afjQ8R1M2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
H2afjQ8R1M2 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.9■■□□□ 1.42
H2afjQ8R1M2 Zxda-201ENSMUST00000117281 2621 ntBASIC23.9■■□□□ 1.42
H2afjQ8R1M2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
H2afjQ8R1M2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
H2afjQ8R1M2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
H2afjQ8R1M2 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.85■■□□□ 1.41
H2afjQ8R1M2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
H2afjQ8R1M2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms