Protein–RNA interactions for Protein: Q8K406

Lgi3, Leucine-rich repeat LGI family member 3, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lgi3Q8K406 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Lgi3Q8K406 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Lgi3Q8K406 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.51■■□□□ 1.35
Lgi3Q8K406 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lgi3Q8K406 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Lgi3Q8K406 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.41■■□□□ 1.34
Lgi3Q8K406 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Lgi3Q8K406 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Lgi3Q8K406 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
Lgi3Q8K406 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Lgi3Q8K406 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Lgi3Q8K406 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Lgi3Q8K406 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.22■■□□□ 1.31
Lgi3Q8K406 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Lgi3Q8K406 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Lgi3Q8K406 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.16■■□□□ 1.3
Lgi3Q8K406 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.16■■□□□ 1.3
Lgi3Q8K406 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Lgi3Q8K406 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Lgi3Q8K406 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Lgi3Q8K406 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Lgi3Q8K406 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lgi3Q8K406 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Lgi3Q8K406 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.09■■□□□ 1.29
Lgi3Q8K406 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.05■■□□□ 1.28
Lgi3Q8K406 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.03■■□□□ 1.28
Lgi3Q8K406 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Lgi3Q8K406 Rab21-202ENSMUST00000218831 843 ntBASIC23.02■■□□□ 1.28
Lgi3Q8K406 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Lgi3Q8K406 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lgi3Q8K406 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Lgi3Q8K406 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Lgi3Q8K406 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Lgi3Q8K406 Zfp131-207ENSMUST00000224946 1783 ntBASIC22.96■■□□□ 1.27
Lgi3Q8K406 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Lgi3Q8K406 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Lgi3Q8K406 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lgi3Q8K406 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Lgi3Q8K406 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Lgi3Q8K406 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Lgi3Q8K406 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
Lgi3Q8K406 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
Lgi3Q8K406 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.86■■□□□ 1.25
Lgi3Q8K406 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Lgi3Q8K406 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.84■■□□□ 1.25
Lgi3Q8K406 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Lgi3Q8K406 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Lgi3Q8K406 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Lgi3Q8K406 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.81■■□□□ 1.24
Lgi3Q8K406 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Lgi3Q8K406 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Lgi3Q8K406 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Lgi3Q8K406 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Lgi3Q8K406 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.76■■□□□ 1.23
Lgi3Q8K406 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Lgi3Q8K406 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Lgi3Q8K406 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Lgi3Q8K406 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Lgi3Q8K406 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.73■■□□□ 1.23
Lgi3Q8K406 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.72■■□□□ 1.23
Lgi3Q8K406 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Lgi3Q8K406 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Lgi3Q8K406 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Lgi3Q8K406 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lgi3Q8K406 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Lgi3Q8K406 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Lgi3Q8K406 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.64■■□□□ 1.21
Lgi3Q8K406 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.64■■□□□ 1.21
Lgi3Q8K406 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
Lgi3Q8K406 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Lgi3Q8K406 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Lgi3Q8K406 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Lgi3Q8K406 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Lgi3Q8K406 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Lgi3Q8K406 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Lgi3Q8K406 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Lgi3Q8K406 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Lgi3Q8K406 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.47■■□□□ 1.19
Lgi3Q8K406 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
Lgi3Q8K406 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Lgi3Q8K406 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.45■■□□□ 1.18
Lgi3Q8K406 Gm25262-201ENSMUST00000174934 133 ntBASIC22.44■■□□□ 1.18
Lgi3Q8K406 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.41■■□□□ 1.18
Lgi3Q8K406 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Lgi3Q8K406 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.38■■□□□ 1.17
Lgi3Q8K406 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Lgi3Q8K406 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Lgi3Q8K406 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.36■■□□□ 1.17
Lgi3Q8K406 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
Lgi3Q8K406 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Lgi3Q8K406 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Lgi3Q8K406 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lgi3Q8K406 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Lgi3Q8K406 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Lgi3Q8K406 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lgi3Q8K406 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Lgi3Q8K406 Mipep-204ENSMUST00000225043 1548 ntBASIC22.28■■□□□ 1.16
Lgi3Q8K406 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Lgi3Q8K406 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Lgi3Q8K406 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms