Protein–RNA interactions for Protein: Q8C940

A730049H05Rik, RIKEN cDNA A730049H05 gene, mousemouse

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A730049H05RikQ8C940 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC25.03■■□□□ 1.6
A730049H05RikQ8C940 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC25.01■■□□□ 1.59
A730049H05RikQ8C940 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
A730049H05RikQ8C940 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
A730049H05RikQ8C940 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
A730049H05RikQ8C940 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC24.9■■□□□ 1.58
A730049H05RikQ8C940 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
A730049H05RikQ8C940 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.82■■□□□ 1.56
A730049H05RikQ8C940 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
A730049H05RikQ8C940 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
A730049H05RikQ8C940 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
A730049H05RikQ8C940 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
A730049H05RikQ8C940 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
A730049H05RikQ8C940 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
A730049H05RikQ8C940 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC24.67■■□□□ 1.54
A730049H05RikQ8C940 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
A730049H05RikQ8C940 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC24.66■■□□□ 1.54
A730049H05RikQ8C940 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
A730049H05RikQ8C940 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC24.65■■□□□ 1.54
A730049H05RikQ8C940 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
A730049H05RikQ8C940 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
A730049H05RikQ8C940 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
A730049H05RikQ8C940 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.58■■□□□ 1.52
A730049H05RikQ8C940 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
A730049H05RikQ8C940 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC24.52■■□□□ 1.52
A730049H05RikQ8C940 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
A730049H05RikQ8C940 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC24.49■■□□□ 1.51
A730049H05RikQ8C940 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
A730049H05RikQ8C940 Zfp131-207ENSMUST00000224946 1783 ntBASIC24.45■■□□□ 1.5
A730049H05RikQ8C940 Rab21-202ENSMUST00000218831 843 ntBASIC24.43■■□□□ 1.5
A730049H05RikQ8C940 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
A730049H05RikQ8C940 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
A730049H05RikQ8C940 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
A730049H05RikQ8C940 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.36■■□□□ 1.49
A730049H05RikQ8C940 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
A730049H05RikQ8C940 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
A730049H05RikQ8C940 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
A730049H05RikQ8C940 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
A730049H05RikQ8C940 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
A730049H05RikQ8C940 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
A730049H05RikQ8C940 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
A730049H05RikQ8C940 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC24.29■■□□□ 1.48
A730049H05RikQ8C940 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
A730049H05RikQ8C940 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
A730049H05RikQ8C940 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC24.26■■□□□ 1.47
A730049H05RikQ8C940 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
A730049H05RikQ8C940 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
A730049H05RikQ8C940 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
A730049H05RikQ8C940 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC24.23■■□□□ 1.47
A730049H05RikQ8C940 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
A730049H05RikQ8C940 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.46
A730049H05RikQ8C940 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC24.19■■□□□ 1.46
A730049H05RikQ8C940 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
A730049H05RikQ8C940 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
A730049H05RikQ8C940 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
A730049H05RikQ8C940 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
A730049H05RikQ8C940 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.15■■□□□ 1.46
A730049H05RikQ8C940 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC24.15■■□□□ 1.46
A730049H05RikQ8C940 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC24.14■■□□□ 1.45
A730049H05RikQ8C940 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC24.13■■□□□ 1.45
A730049H05RikQ8C940 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.12■■□□□ 1.45
A730049H05RikQ8C940 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
A730049H05RikQ8C940 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
A730049H05RikQ8C940 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
A730049H05RikQ8C940 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
A730049H05RikQ8C940 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
A730049H05RikQ8C940 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
A730049H05RikQ8C940 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
A730049H05RikQ8C940 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
A730049H05RikQ8C940 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.03■■□□□ 1.44
A730049H05RikQ8C940 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
A730049H05RikQ8C940 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
A730049H05RikQ8C940 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
A730049H05RikQ8C940 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
A730049H05RikQ8C940 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.94■■□□□ 1.42
A730049H05RikQ8C940 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC23.92■■□□□ 1.42
A730049H05RikQ8C940 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
A730049H05RikQ8C940 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
A730049H05RikQ8C940 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
A730049H05RikQ8C940 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.83■■□□□ 1.41
A730049H05RikQ8C940 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
A730049H05RikQ8C940 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
A730049H05RikQ8C940 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
A730049H05RikQ8C940 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
A730049H05RikQ8C940 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.79■■□□□ 1.4
A730049H05RikQ8C940 AL845457.1-201ENSMUST00000197244 68 ntBASIC23.79■■□□□ 1.4
A730049H05RikQ8C940 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
A730049H05RikQ8C940 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
A730049H05RikQ8C940 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
A730049H05RikQ8C940 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
A730049H05RikQ8C940 Gm25262-201ENSMUST00000174934 133 ntBASIC23.77■■□□□ 1.4
A730049H05RikQ8C940 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
A730049H05RikQ8C940 Mipep-204ENSMUST00000225043 1548 ntBASIC23.71■■□□□ 1.39
A730049H05RikQ8C940 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
A730049H05RikQ8C940 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
A730049H05RikQ8C940 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
A730049H05RikQ8C940 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
A730049H05RikQ8C940 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
A730049H05RikQ8C940 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
A730049H05RikQ8C940 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms