Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Tsen54Q8C2A2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Tsen54Q8C2A2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Tsen54Q8C2A2 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC22.59■■□□□ 1.21
Tsen54Q8C2A2 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Tsen54Q8C2A2 Gm25238-201ENSMUST00000174914 89 ntBASIC22.57■■□□□ 1.2
Tsen54Q8C2A2 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Tsen54Q8C2A2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Tsen54Q8C2A2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Tsen54Q8C2A2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Tsen54Q8C2A2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
Tsen54Q8C2A2 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Tsen54Q8C2A2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Tsen54Q8C2A2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.33■■□□□ 1.16
Tsen54Q8C2A2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Tsen54Q8C2A2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tsen54Q8C2A2 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tsen54Q8C2A2 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Tsen54Q8C2A2 Gm27325-201ENSMUST00000175467 74 ntBASIC22.22■■□□□ 1.15
Tsen54Q8C2A2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Tsen54Q8C2A2 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
Tsen54Q8C2A2 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC22.2■■□□□ 1.14
Tsen54Q8C2A2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Tsen54Q8C2A2 Zxda-201ENSMUST00000117281 2621 ntBASIC22.18■■□□□ 1.14
Tsen54Q8C2A2 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Tsen54Q8C2A2 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Tsen54Q8C2A2 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Tsen54Q8C2A2 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Tsen54Q8C2A2 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tsen54Q8C2A2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Tsen54Q8C2A2 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Tsen54Q8C2A2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tsen54Q8C2A2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Tsen54Q8C2A2 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC22.04■■□□□ 1.12
Tsen54Q8C2A2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Tsen54Q8C2A2 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC22■■□□□ 1.11
Tsen54Q8C2A2 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Tsen54Q8C2A2 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.98■■□□□ 1.11
Tsen54Q8C2A2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Tsen54Q8C2A2 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Tsen54Q8C2A2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Tsen54Q8C2A2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Tsen54Q8C2A2 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Tsen54Q8C2A2 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.93■■□□□ 1.1
Tsen54Q8C2A2 Gm2415-204ENSMUST00000190235 2004 ntBASIC21.93■■□□□ 1.1
Tsen54Q8C2A2 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Tsen54Q8C2A2 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Tsen54Q8C2A2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tsen54Q8C2A2 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Tsen54Q8C2A2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tsen54Q8C2A2 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tsen54Q8C2A2 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Tsen54Q8C2A2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Tsen54Q8C2A2 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Tsen54Q8C2A2 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Tsen54Q8C2A2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
Tsen54Q8C2A2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Tsen54Q8C2A2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Tsen54Q8C2A2 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Tsen54Q8C2A2 Gm9905-201ENSMUST00000065740 1845 ntBASIC21.78■■□□□ 1.08
Tsen54Q8C2A2 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tsen54Q8C2A2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Tsen54Q8C2A2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Tsen54Q8C2A2 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Tsen54Q8C2A2 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC21.73■■□□□ 1.07
Tsen54Q8C2A2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Tsen54Q8C2A2 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Tsen54Q8C2A2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Tsen54Q8C2A2 Rab21-202ENSMUST00000218831 843 ntBASIC21.69■■□□□ 1.06
Tsen54Q8C2A2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Tsen54Q8C2A2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tsen54Q8C2A2 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tsen54Q8C2A2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Tsen54Q8C2A2 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.65■■□□□ 1.06
Tsen54Q8C2A2 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tsen54Q8C2A2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tsen54Q8C2A2 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tsen54Q8C2A2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.64■■□□□ 1.06
Tsen54Q8C2A2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tsen54Q8C2A2 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tsen54Q8C2A2 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.63■■□□□ 1.05
Tsen54Q8C2A2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tsen54Q8C2A2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Tsen54Q8C2A2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.6■■□□□ 1.05
Tsen54Q8C2A2 Gm6206-201ENSMUST00000133472 2199 ntBASIC21.59■■□□□ 1.05
Tsen54Q8C2A2 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tsen54Q8C2A2 Gm25262-201ENSMUST00000174934 133 ntBASIC21.56■■□□□ 1.04
Tsen54Q8C2A2 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tsen54Q8C2A2 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Tsen54Q8C2A2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tsen54Q8C2A2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tsen54Q8C2A2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Tsen54Q8C2A2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tsen54Q8C2A2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tsen54Q8C2A2 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Tsen54Q8C2A2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.47■■□□□ 1.03
Tsen54Q8C2A2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Tsen54Q8C2A2 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
Tsen54Q8C2A2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.44■■□□□ 1.02
Tsen54Q8C2A2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 331 ms