Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Suds3Q8BR65 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
Suds3Q8BR65 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Suds3Q8BR65 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Suds3Q8BR65 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Suds3Q8BR65 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Suds3Q8BR65 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Suds3Q8BR65 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Suds3Q8BR65 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Suds3Q8BR65 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.75■■■□□ 2.03
Suds3Q8BR65 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.75■■■□□ 2.03
Suds3Q8BR65 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.74■■■□□ 2.03
Suds3Q8BR65 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.73■■■□□ 2.03
Suds3Q8BR65 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Suds3Q8BR65 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.69■■■□□ 2.02
Suds3Q8BR65 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.67■■■□□ 2.02
Suds3Q8BR65 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Suds3Q8BR65 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Suds3Q8BR65 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.63■■■□□ 2.01
Suds3Q8BR65 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
Suds3Q8BR65 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Suds3Q8BR65 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
Suds3Q8BR65 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.54■■■□□ 2
Suds3Q8BR65 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Suds3Q8BR65 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Suds3Q8BR65 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Suds3Q8BR65 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Suds3Q8BR65 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
Suds3Q8BR65 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.43■■□□□ 1.98
Suds3Q8BR65 Gm26115-201ENSMUST00000175605 87 ntBASIC27.4■■□□□ 1.98
Suds3Q8BR65 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Suds3Q8BR65 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.38■■□□□ 1.97
Suds3Q8BR65 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
Suds3Q8BR65 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
Suds3Q8BR65 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.33■■□□□ 1.97
Suds3Q8BR65 Gm8109-201ENSMUST00000194076 746 ntBASIC27.33■■□□□ 1.97
Suds3Q8BR65 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.31■■□□□ 1.96
Suds3Q8BR65 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.29■■□□□ 1.96
Suds3Q8BR65 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Suds3Q8BR65 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.26■■□□□ 1.95
Suds3Q8BR65 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
Suds3Q8BR65 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Suds3Q8BR65 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Suds3Q8BR65 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.94
Suds3Q8BR65 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Suds3Q8BR65 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.18■■□□□ 1.94
Suds3Q8BR65 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Suds3Q8BR65 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Suds3Q8BR65 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.11■■□□□ 1.93
Suds3Q8BR65 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Suds3Q8BR65 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.08■■□□□ 1.93
Suds3Q8BR65 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Suds3Q8BR65 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.06■■□□□ 1.92
Suds3Q8BR65 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Suds3Q8BR65 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Suds3Q8BR65 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Suds3Q8BR65 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
Suds3Q8BR65 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Suds3Q8BR65 Gm17082-201ENSMUST00000166043 1091 ntBASIC27■■□□□ 1.91
Suds3Q8BR65 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Suds3Q8BR65 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Suds3Q8BR65 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Suds3Q8BR65 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
Suds3Q8BR65 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Suds3Q8BR65 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Suds3Q8BR65 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
Suds3Q8BR65 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
Suds3Q8BR65 Gm27322-201ENSMUST00000184007 104 ntBASIC26.9■■□□□ 1.9
Suds3Q8BR65 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.87■■□□□ 1.89
Suds3Q8BR65 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.87■■□□□ 1.89
Suds3Q8BR65 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Suds3Q8BR65 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Suds3Q8BR65 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Suds3Q8BR65 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Suds3Q8BR65 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
Suds3Q8BR65 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
Suds3Q8BR65 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Suds3Q8BR65 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
Suds3Q8BR65 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.68■■□□□ 1.86
Suds3Q8BR65 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Suds3Q8BR65 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Suds3Q8BR65 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Suds3Q8BR65 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.65■■□□□ 1.86
Suds3Q8BR65 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Suds3Q8BR65 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.61■■□□□ 1.85
Suds3Q8BR65 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Suds3Q8BR65 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Suds3Q8BR65 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
Suds3Q8BR65 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Suds3Q8BR65 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Suds3Q8BR65 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
Suds3Q8BR65 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Suds3Q8BR65 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Suds3Q8BR65 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Suds3Q8BR65 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.45■■□□□ 1.82
Suds3Q8BR65 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
Suds3Q8BR65 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.43■■□□□ 1.82
Suds3Q8BR65 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Suds3Q8BR65 Mipep-204ENSMUST00000225043 1548 ntBASIC26.41■■□□□ 1.82
Suds3Q8BR65 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms