Protein–RNA interactions for Protein: Q8BKD6

Rnf144b, E3 ubiquitin-protein ligase RNF144B, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144bQ8BKD6 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Rnf144bQ8BKD6 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Rnf144bQ8BKD6 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
Rnf144bQ8BKD6 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC23.59■■□□□ 1.37
Rnf144bQ8BKD6 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
Rnf144bQ8BKD6 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Rnf144bQ8BKD6 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC23.51■■□□□ 1.35
Rnf144bQ8BKD6 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC23.44■■□□□ 1.34
Rnf144bQ8BKD6 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Rnf144bQ8BKD6 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC23.33■■□□□ 1.33
Rnf144bQ8BKD6 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rnf144bQ8BKD6 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC23.31■■□□□ 1.32
Rnf144bQ8BKD6 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Rnf144bQ8BKD6 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rnf144bQ8BKD6 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf144bQ8BKD6 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf144bQ8BKD6 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC23.22■■□□□ 1.31
Rnf144bQ8BKD6 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf144bQ8BKD6 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf144bQ8BKD6 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf144bQ8BKD6 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC23.2■■□□□ 1.3
Rnf144bQ8BKD6 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf144bQ8BKD6 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf144bQ8BKD6 Rab21-202ENSMUST00000218831 843 ntBASIC23.14■■□□□ 1.29
Rnf144bQ8BKD6 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnf144bQ8BKD6 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf144bQ8BKD6 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf144bQ8BKD6 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf144bQ8BKD6 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf144bQ8BKD6 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf144bQ8BKD6 Zfp131-207ENSMUST00000224946 1783 ntBASIC23.04■■□□□ 1.28
Rnf144bQ8BKD6 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Rnf144bQ8BKD6 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rnf144bQ8BKD6 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf144bQ8BKD6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf144bQ8BKD6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf144bQ8BKD6 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23■■□□□ 1.27
Rnf144bQ8BKD6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22.98■■□□□ 1.27
Rnf144bQ8BKD6 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22.97■■□□□ 1.27
Rnf144bQ8BKD6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22.97■■□□□ 1.27
Rnf144bQ8BKD6 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
Rnf144bQ8BKD6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.95■■□□□ 1.27
Rnf144bQ8BKD6 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf144bQ8BKD6 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf144bQ8BKD6 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22.9■■□□□ 1.26
Rnf144bQ8BKD6 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf144bQ8BKD6 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf144bQ8BKD6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rnf144bQ8BKD6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf144bQ8BKD6 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22.86■■□□□ 1.25
Rnf144bQ8BKD6 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
Rnf144bQ8BKD6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rnf144bQ8BKD6 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Rnf144bQ8BKD6 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
Rnf144bQ8BKD6 Gm25262-201ENSMUST00000174934 133 ntBASIC22.83■■□□□ 1.25
Rnf144bQ8BKD6 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Rnf144bQ8BKD6 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf144bQ8BKD6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Rnf144bQ8BKD6 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Rnf144bQ8BKD6 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Rnf144bQ8BKD6 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22.76■■□□□ 1.23
Rnf144bQ8BKD6 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf144bQ8BKD6 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf144bQ8BKD6 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Rnf144bQ8BKD6 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Rnf144bQ8BKD6 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.67■■□□□ 1.22
Rnf144bQ8BKD6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC22.66■■□□□ 1.22
Rnf144bQ8BKD6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf144bQ8BKD6 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf144bQ8BKD6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Rnf144bQ8BKD6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Rnf144bQ8BKD6 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Rnf144bQ8BKD6 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Rnf144bQ8BKD6 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Rnf144bQ8BKD6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Rnf144bQ8BKD6 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Rnf144bQ8BKD6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf144bQ8BKD6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Rnf144bQ8BKD6 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.5■■□□□ 1.19
Rnf144bQ8BKD6 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.47■■□□□ 1.19
Rnf144bQ8BKD6 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.45■■□□□ 1.19
Rnf144bQ8BKD6 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.44■■□□□ 1.18
Rnf144bQ8BKD6 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
Rnf144bQ8BKD6 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.43■■□□□ 1.18
Rnf144bQ8BKD6 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.43■■□□□ 1.18
Rnf144bQ8BKD6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Rnf144bQ8BKD6 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rnf144bQ8BKD6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf144bQ8BKD6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rnf144bQ8BKD6 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rnf144bQ8BKD6 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf144bQ8BKD6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rnf144bQ8BKD6 Mipep-204ENSMUST00000225043 1548 ntBASIC22.34■■□□□ 1.17
Rnf144bQ8BKD6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rnf144bQ8BKD6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC22.33■■□□□ 1.17
Rnf144bQ8BKD6 Gm26115-201ENSMUST00000175605 87 ntBASIC22.33■■□□□ 1.17
Rnf144bQ8BKD6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Rnf144bQ8BKD6 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
Rnf144bQ8BKD6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
Rnf144bQ8BKD6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms