Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.29■■□□□ 1.96
Ubp1Q811S7 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Ubp1Q811S7 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.27■■□□□ 1.96
Ubp1Q811S7 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Ubp1Q811S7 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
Ubp1Q811S7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Ubp1Q811S7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
Ubp1Q811S7 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Ubp1Q811S7 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Ubp1Q811S7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Ubp1Q811S7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.12■■□□□ 1.93
Ubp1Q811S7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.1■■□□□ 1.93
Ubp1Q811S7 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Ubp1Q811S7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
Ubp1Q811S7 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Ubp1Q811S7 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Ubp1Q811S7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.04■■□□□ 1.92
Ubp1Q811S7 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Ubp1Q811S7 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Ubp1Q811S7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Ubp1Q811S7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.88■■□□□ 1.89
Ubp1Q811S7 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Ubp1Q811S7 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ubp1Q811S7 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Ubp1Q811S7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.83■■□□□ 1.89
Ubp1Q811S7 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ubp1Q811S7 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Ubp1Q811S7 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Ubp1Q811S7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26.76■■□□□ 1.87
Ubp1Q811S7 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Ubp1Q811S7 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Ubp1Q811S7 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Ubp1Q811S7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Ubp1Q811S7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.66■■□□□ 1.86
Ubp1Q811S7 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.66■■□□□ 1.86
Ubp1Q811S7 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.65■■□□□ 1.86
Ubp1Q811S7 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Ubp1Q811S7 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
Ubp1Q811S7 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ubp1Q811S7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Ubp1Q811S7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Ubp1Q811S7 Gm26115-201ENSMUST00000175605 87 ntBASIC26.6■■□□□ 1.85
Ubp1Q811S7 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Ubp1Q811S7 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Ubp1Q811S7 Gm8109-201ENSMUST00000194076 746 ntBASIC26.53■■□□□ 1.84
Ubp1Q811S7 Gm17082-201ENSMUST00000166043 1091 ntBASIC26.51■■□□□ 1.83
Ubp1Q811S7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Ubp1Q811S7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ubp1Q811S7 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Ubp1Q811S7 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Ubp1Q811S7 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Ubp1Q811S7 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Ubp1Q811S7 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.44■■□□□ 1.82
Ubp1Q811S7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC26.44■■□□□ 1.82
Ubp1Q811S7 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Ubp1Q811S7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Ubp1Q811S7 Gm27322-201ENSMUST00000184007 104 ntBASIC26.42■■□□□ 1.82
Ubp1Q811S7 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Ubp1Q811S7 AL845457.1-201ENSMUST00000197244 68 ntBASIC26.41■■□□□ 1.82
Ubp1Q811S7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.82
Ubp1Q811S7 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Ubp1Q811S7 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Ubp1Q811S7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.33■■□□□ 1.81
Ubp1Q811S7 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC26.31■■□□□ 1.8
Ubp1Q811S7 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Ubp1Q811S7 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Ubp1Q811S7 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ubp1Q811S7 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Ubp1Q811S7 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ubp1Q811S7 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ubp1Q811S7 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Ubp1Q811S7 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.14■■□□□ 1.78
Ubp1Q811S7 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.12■■□□□ 1.77
Ubp1Q811S7 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ubp1Q811S7 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
Ubp1Q811S7 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.09■■□□□ 1.77
Ubp1Q811S7 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Ubp1Q811S7 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Ubp1Q811S7 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
Ubp1Q811S7 Mipep-204ENSMUST00000225043 1548 ntBASIC26.05■■□□□ 1.76
Ubp1Q811S7 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
Ubp1Q811S7 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Ubp1Q811S7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Ubp1Q811S7 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
Ubp1Q811S7 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ubp1Q811S7 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ubp1Q811S7 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Ubp1Q811S7 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ubp1Q811S7 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ubp1Q811S7 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ubp1Q811S7 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ubp1Q811S7 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ubp1Q811S7 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC25.83■■□□□ 1.73
Ubp1Q811S7 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ubp1Q811S7 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ubp1Q811S7 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.8■■□□□ 1.72
Ubp1Q811S7 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ubp1Q811S7 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubp1Q811S7 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC25.79■■□□□ 1.72
Ubp1Q811S7 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.77■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms