Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
Usp8Q80U87 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Usp8Q80U87 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.13■■□□□ 1.93
Usp8Q80U87 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.1■■□□□ 1.93
Usp8Q80U87 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Usp8Q80U87 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.08■■□□□ 1.93
Usp8Q80U87 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Usp8Q80U87 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Usp8Q80U87 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Usp8Q80U87 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
Usp8Q80U87 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.94■■□□□ 1.9
Usp8Q80U87 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
Usp8Q80U87 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Usp8Q80U87 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
Usp8Q80U87 Rab21-202ENSMUST00000218831 843 ntBASIC26.9■■□□□ 1.9
Usp8Q80U87 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Usp8Q80U87 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
Usp8Q80U87 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Usp8Q80U87 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.81■■□□□ 1.88
Usp8Q80U87 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
Usp8Q80U87 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Usp8Q80U87 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.74■■□□□ 1.87
Usp8Q80U87 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
Usp8Q80U87 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.73■■□□□ 1.87
Usp8Q80U87 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Usp8Q80U87 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Usp8Q80U87 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.67■■□□□ 1.86
Usp8Q80U87 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Usp8Q80U87 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Usp8Q80U87 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Usp8Q80U87 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
Usp8Q80U87 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
Usp8Q80U87 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Usp8Q80U87 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
Usp8Q80U87 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.57■■□□□ 1.84
Usp8Q80U87 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Usp8Q80U87 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.56■■□□□ 1.84
Usp8Q80U87 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
Usp8Q80U87 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.54■■□□□ 1.84
Usp8Q80U87 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Usp8Q80U87 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
Usp8Q80U87 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.53■■□□□ 1.84
Usp8Q80U87 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.51■■□□□ 1.83
Usp8Q80U87 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
Usp8Q80U87 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Usp8Q80U87 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
Usp8Q80U87 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Usp8Q80U87 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Usp8Q80U87 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.47■■□□□ 1.83
Usp8Q80U87 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Usp8Q80U87 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Usp8Q80U87 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
Usp8Q80U87 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Usp8Q80U87 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Usp8Q80U87 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Usp8Q80U87 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Usp8Q80U87 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Usp8Q80U87 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Usp8Q80U87 Gm25262-201ENSMUST00000174934 133 ntBASIC26.3■■□□□ 1.8
Usp8Q80U87 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Usp8Q80U87 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.29■■□□□ 1.8
Usp8Q80U87 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.29■■□□□ 1.8
Usp8Q80U87 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
Usp8Q80U87 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.26■■□□□ 1.79
Usp8Q80U87 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Usp8Q80U87 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Usp8Q80U87 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Usp8Q80U87 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Usp8Q80U87 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Usp8Q80U87 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Usp8Q80U87 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Usp8Q80U87 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
Usp8Q80U87 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
Usp8Q80U87 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Usp8Q80U87 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
Usp8Q80U87 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
Usp8Q80U87 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
Usp8Q80U87 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Usp8Q80U87 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
Usp8Q80U87 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.97■■□□□ 1.75
Usp8Q80U87 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Usp8Q80U87 Zxda-201ENSMUST00000117281 2621 ntBASIC25.95■■□□□ 1.74
Usp8Q80U87 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Usp8Q80U87 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Usp8Q80U87 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Usp8Q80U87 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.92■■□□□ 1.74
Usp8Q80U87 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Usp8Q80U87 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Usp8Q80U87 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.9■■□□□ 1.74
Usp8Q80U87 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Usp8Q80U87 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Usp8Q80U87 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
Usp8Q80U87 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Usp8Q80U87 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Usp8Q80U87 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.84■■□□□ 1.73
Usp8Q80U87 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Usp8Q80U87 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Usp8Q80U87 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.81■■□□□ 1.72
Usp8Q80U87 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Usp8Q80U87 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms