Protein–RNA interactions for Protein: Q6DD96

Pcdhga7, Protocadherin gamma subfamily A, 7, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga7Q6DD96 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhga7Q6DD96 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhga7Q6DD96 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhga7Q6DD96 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26.65■■□□□ 1.86
Pcdhga7Q6DD96 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Pcdhga7Q6DD96 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.61■■□□□ 1.85
Pcdhga7Q6DD96 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
Pcdhga7Q6DD96 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhga7Q6DD96 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
Pcdhga7Q6DD96 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhga7Q6DD96 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.38■■□□□ 1.81
Pcdhga7Q6DD96 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.34■■□□□ 1.81
Pcdhga7Q6DD96 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Pcdhga7Q6DD96 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhga7Q6DD96 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Pcdhga7Q6DD96 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Pcdhga7Q6DD96 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.28■■□□□ 1.8
Pcdhga7Q6DD96 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhga7Q6DD96 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Pcdhga7Q6DD96 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.26■■□□□ 1.79
Pcdhga7Q6DD96 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Pcdhga7Q6DD96 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Pcdhga7Q6DD96 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Pcdhga7Q6DD96 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Pcdhga7Q6DD96 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Pcdhga7Q6DD96 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Pcdhga7Q6DD96 Rab21-202ENSMUST00000218831 843 ntBASIC26.16■■□□□ 1.78
Pcdhga7Q6DD96 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Pcdhga7Q6DD96 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Pcdhga7Q6DD96 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
Pcdhga7Q6DD96 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.06■■□□□ 1.76
Pcdhga7Q6DD96 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.06■■□□□ 1.76
Pcdhga7Q6DD96 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhga7Q6DD96 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Pcdhga7Q6DD96 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhga7Q6DD96 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.03■■□□□ 1.76
Pcdhga7Q6DD96 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Pcdhga7Q6DD96 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
Pcdhga7Q6DD96 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.01■■□□□ 1.75
Pcdhga7Q6DD96 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
Pcdhga7Q6DD96 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Pcdhga7Q6DD96 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.98■■□□□ 1.75
Pcdhga7Q6DD96 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Pcdhga7Q6DD96 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Pcdhga7Q6DD96 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC25.95■■□□□ 1.75
Pcdhga7Q6DD96 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Pcdhga7Q6DD96 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Pcdhga7Q6DD96 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
Pcdhga7Q6DD96 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC25.89■■□□□ 1.74
Pcdhga7Q6DD96 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Pcdhga7Q6DD96 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Pcdhga7Q6DD96 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Pcdhga7Q6DD96 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhga7Q6DD96 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Pcdhga7Q6DD96 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Pcdhga7Q6DD96 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
Pcdhga7Q6DD96 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.83■■□□□ 1.73
Pcdhga7Q6DD96 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Pcdhga7Q6DD96 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Pcdhga7Q6DD96 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25.8■■□□□ 1.72
Pcdhga7Q6DD96 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Pcdhga7Q6DD96 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Pcdhga7Q6DD96 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.76■■□□□ 1.71
Pcdhga7Q6DD96 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Pcdhga7Q6DD96 Zxda-201ENSMUST00000117281 2621 ntBASIC25.74■■□□□ 1.71
Pcdhga7Q6DD96 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Pcdhga7Q6DD96 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Pcdhga7Q6DD96 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Pcdhga7Q6DD96 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhga7Q6DD96 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.69■■□□□ 1.7
Pcdhga7Q6DD96 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Pcdhga7Q6DD96 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
Pcdhga7Q6DD96 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhga7Q6DD96 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Pcdhga7Q6DD96 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhga7Q6DD96 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Pcdhga7Q6DD96 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.62■■□□□ 1.69
Pcdhga7Q6DD96 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
Pcdhga7Q6DD96 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Pcdhga7Q6DD96 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Pcdhga7Q6DD96 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Pcdhga7Q6DD96 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
Pcdhga7Q6DD96 Gm25262-201ENSMUST00000174934 133 ntBASIC25.49■■□□□ 1.67
Pcdhga7Q6DD96 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Pcdhga7Q6DD96 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.45■■□□□ 1.66
Pcdhga7Q6DD96 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC25.44■■□□□ 1.66
Pcdhga7Q6DD96 Gm6658-202ENSMUST00000209493 1885 ntBASIC25.43■■□□□ 1.66
Pcdhga7Q6DD96 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Pcdhga7Q6DD96 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.4■■□□□ 1.66
Pcdhga7Q6DD96 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Pcdhga7Q6DD96 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhga7Q6DD96 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Pcdhga7Q6DD96 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhga7Q6DD96 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Pcdhga7Q6DD96 Mipep-204ENSMUST00000225043 1548 ntBASIC25.28■■□□□ 1.64
Pcdhga7Q6DD96 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhga7Q6DD96 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhga7Q6DD96 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Pcdhga7Q6DD96 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
Pcdhga7Q6DD96 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms