Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ss18Q62280 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ss18Q62280 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ss18Q62280 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ss18Q62280 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ss18Q62280 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ss18Q62280 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ss18Q62280 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ss18Q62280 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ss18Q62280 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ss18Q62280 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Ss18Q62280 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ss18Q62280 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.75■□□□□ 0.75
Ss18Q62280 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ss18Q62280 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
Ss18Q62280 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.72■□□□□ 0.75
Ss18Q62280 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ss18Q62280 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.7■□□□□ 0.74
Ss18Q62280 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ss18Q62280 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.68■□□□□ 0.74
Ss18Q62280 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ss18Q62280 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ss18Q62280 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ss18Q62280 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ss18Q62280 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ss18Q62280 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.57■□□□□ 0.72
Ss18Q62280 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ss18Q62280 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.55■□□□□ 0.72
Ss18Q62280 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ss18Q62280 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ss18Q62280 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC19.53■□□□□ 0.72
Ss18Q62280 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Ss18Q62280 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ss18Q62280 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Ss18Q62280 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Ss18Q62280 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.5■□□□□ 0.71
Ss18Q62280 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ss18Q62280 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Ss18Q62280 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Ss18Q62280 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ss18Q62280 Rab21-202ENSMUST00000218831 843 ntBASIC19.48■□□□□ 0.71
Ss18Q62280 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Ss18Q62280 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.48■□□□□ 0.71
Ss18Q62280 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Ss18Q62280 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ss18Q62280 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.42■□□□□ 0.7
Ss18Q62280 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ss18Q62280 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ss18Q62280 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Ss18Q62280 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Ss18Q62280 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Ss18Q62280 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.37■□□□□ 0.69
Ss18Q62280 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Ss18Q62280 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ss18Q62280 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.34■□□□□ 0.69
Ss18Q62280 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ss18Q62280 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ss18Q62280 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ss18Q62280 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ss18Q62280 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ss18Q62280 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ss18Q62280 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ss18Q62280 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Ss18Q62280 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.27■□□□□ 0.68
Ss18Q62280 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ss18Q62280 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ss18Q62280 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.26■□□□□ 0.67
Ss18Q62280 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ss18Q62280 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ss18Q62280 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ss18Q62280 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ss18Q62280 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Ss18Q62280 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ss18Q62280 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ss18Q62280 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Ss18Q62280 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.14■□□□□ 0.65
Ss18Q62280 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ss18Q62280 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ss18Q62280 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ss18Q62280 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18Q62280 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18Q62280 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18Q62280 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ss18Q62280 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ss18Q62280 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Ss18Q62280 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.07■□□□□ 0.64
Ss18Q62280 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ss18Q62280 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.06■□□□□ 0.64
Ss18Q62280 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ss18Q62280 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ss18Q62280 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ss18Q62280 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Ss18Q62280 Gm25262-201ENSMUST00000174934 133 ntBASIC19.03■□□□□ 0.64
Ss18Q62280 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Ss18Q62280 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ss18Q62280 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
Ss18Q62280 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ss18Q62280 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ss18Q62280 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Ss18Q62280 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms