Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sdf4Q61112 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sdf4Q61112 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.04■■■□□ 2.08
Sdf4Q61112 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Sdf4Q61112 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Sdf4Q61112 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.98■■■□□ 2.07
Sdf4Q61112 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Sdf4Q61112 Gm25262-201ENSMUST00000174934 133 ntBASIC27.93■■■□□ 2.06
Sdf4Q61112 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sdf4Q61112 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Sdf4Q61112 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.87■■■□□ 2.05
Sdf4Q61112 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.84■■■□□ 2.05
Sdf4Q61112 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC27.82■■■□□ 2.04
Sdf4Q61112 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Sdf4Q61112 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sdf4Q61112 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Sdf4Q61112 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Sdf4Q61112 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Sdf4Q61112 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Sdf4Q61112 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Sdf4Q61112 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Sdf4Q61112 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Sdf4Q61112 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Sdf4Q61112 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Sdf4Q61112 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Sdf4Q61112 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2
Sdf4Q61112 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Sdf4Q61112 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Sdf4Q61112 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC27.54■■■□□ 2
Sdf4Q61112 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.52■■■□□ 2
Sdf4Q61112 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.51■■■□□ 2
Sdf4Q61112 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Sdf4Q61112 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Sdf4Q61112 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.47■■□□□ 1.99
Sdf4Q61112 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Sdf4Q61112 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Sdf4Q61112 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC27.45■■□□□ 1.98
Sdf4Q61112 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
Sdf4Q61112 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Sdf4Q61112 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Sdf4Q61112 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.36■■□□□ 1.97
Sdf4Q61112 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.31■■□□□ 1.96
Sdf4Q61112 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.3■■□□□ 1.96
Sdf4Q61112 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Sdf4Q61112 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
Sdf4Q61112 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Sdf4Q61112 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Sdf4Q61112 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Sdf4Q61112 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Sdf4Q61112 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
Sdf4Q61112 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Sdf4Q61112 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Sdf4Q61112 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Sdf4Q61112 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
Sdf4Q61112 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
Sdf4Q61112 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.15■■□□□ 1.94
Sdf4Q61112 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Sdf4Q61112 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.12■■□□□ 1.93
Sdf4Q61112 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sdf4Q61112 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Sdf4Q61112 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.92
Sdf4Q61112 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
Sdf4Q61112 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Sdf4Q61112 Gm26115-201ENSMUST00000175605 87 ntBASIC27.03■■□□□ 1.92
Sdf4Q61112 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Sdf4Q61112 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
Sdf4Q61112 Gm27322-201ENSMUST00000184007 104 ntBASIC27.02■■□□□ 1.92
Sdf4Q61112 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.01■■□□□ 1.91
Sdf4Q61112 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27■■□□□ 1.91
Sdf4Q61112 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Sdf4Q61112 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Sdf4Q61112 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
Sdf4Q61112 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Sdf4Q61112 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC26.95■■□□□ 1.9
Sdf4Q61112 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Sdf4Q61112 Gm8109-201ENSMUST00000194076 746 ntBASIC26.91■■□□□ 1.9
Sdf4Q61112 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26.9■■□□□ 1.9
Sdf4Q61112 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
Sdf4Q61112 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC26.86■■□□□ 1.89
Sdf4Q61112 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Sdf4Q61112 Mipep-204ENSMUST00000225043 1548 ntBASIC26.83■■□□□ 1.89
Sdf4Q61112 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Sdf4Q61112 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
Sdf4Q61112 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC26.82■■□□□ 1.88
Sdf4Q61112 AC166822.3-201ENSMUST00000227394 661 ntBASIC26.82■■□□□ 1.88
Sdf4Q61112 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.76■■□□□ 1.88
Sdf4Q61112 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
Sdf4Q61112 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Sdf4Q61112 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC26.72■■□□□ 1.87
Sdf4Q61112 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
Sdf4Q61112 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Sdf4Q61112 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Sdf4Q61112 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.64■■□□□ 1.86
Sdf4Q61112 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Sdf4Q61112 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Sdf4Q61112 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC26.61■■□□□ 1.85
Sdf4Q61112 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Sdf4Q61112 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.59■■□□□ 1.85
Sdf4Q61112 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Sdf4Q61112 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms