Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
Scn2bQ56A07 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Scn2bQ56A07 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Scn2bQ56A07 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Scn2bQ56A07 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Scn2bQ56A07 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Scn2bQ56A07 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.13■■□□□ 1.93
Scn2bQ56A07 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Scn2bQ56A07 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Scn2bQ56A07 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Scn2bQ56A07 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.08■■□□□ 1.93
Scn2bQ56A07 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.07■■□□□ 1.92
Scn2bQ56A07 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Scn2bQ56A07 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Scn2bQ56A07 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Scn2bQ56A07 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Scn2bQ56A07 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC26.95■■□□□ 1.9
Scn2bQ56A07 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Scn2bQ56A07 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Scn2bQ56A07 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Scn2bQ56A07 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
Scn2bQ56A07 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26.83■■□□□ 1.88
Scn2bQ56A07 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC26.82■■□□□ 1.88
Scn2bQ56A07 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26.8■■□□□ 1.88
Scn2bQ56A07 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Scn2bQ56A07 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
Scn2bQ56A07 Rab21-202ENSMUST00000218831 843 ntBASIC26.74■■□□□ 1.87
Scn2bQ56A07 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Scn2bQ56A07 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Scn2bQ56A07 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.69■■□□□ 1.86
Scn2bQ56A07 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Scn2bQ56A07 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Scn2bQ56A07 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Scn2bQ56A07 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Scn2bQ56A07 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26.64■■□□□ 1.86
Scn2bQ56A07 Gm25262-201ENSMUST00000174934 133 ntBASIC26.63■■□□□ 1.85
Scn2bQ56A07 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Scn2bQ56A07 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Scn2bQ56A07 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
Scn2bQ56A07 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.55■■□□□ 1.84
Scn2bQ56A07 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Scn2bQ56A07 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Scn2bQ56A07 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Scn2bQ56A07 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
Scn2bQ56A07 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26.45■■□□□ 1.82
Scn2bQ56A07 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
Scn2bQ56A07 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Scn2bQ56A07 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
Scn2bQ56A07 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Scn2bQ56A07 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26.36■■□□□ 1.81
Scn2bQ56A07 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Scn2bQ56A07 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Scn2bQ56A07 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scn2bQ56A07 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Scn2bQ56A07 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.31■■□□□ 1.8
Scn2bQ56A07 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
Scn2bQ56A07 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Scn2bQ56A07 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26.27■■□□□ 1.8
Scn2bQ56A07 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Scn2bQ56A07 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.25■■□□□ 1.79
Scn2bQ56A07 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Scn2bQ56A07 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Scn2bQ56A07 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.2■■□□□ 1.78
Scn2bQ56A07 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26.2■■□□□ 1.78
Scn2bQ56A07 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Scn2bQ56A07 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Scn2bQ56A07 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Scn2bQ56A07 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
Scn2bQ56A07 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Scn2bQ56A07 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
Scn2bQ56A07 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.15■■□□□ 1.78
Scn2bQ56A07 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Scn2bQ56A07 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Scn2bQ56A07 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Scn2bQ56A07 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26.12■■□□□ 1.77
Scn2bQ56A07 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.12■■□□□ 1.77
Scn2bQ56A07 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.1■■□□□ 1.77
Scn2bQ56A07 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Scn2bQ56A07 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Scn2bQ56A07 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Scn2bQ56A07 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
Scn2bQ56A07 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC26.05■■□□□ 1.76
Scn2bQ56A07 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.04■■□□□ 1.76
Scn2bQ56A07 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Scn2bQ56A07 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
Scn2bQ56A07 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26■■□□□ 1.75
Scn2bQ56A07 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Scn2bQ56A07 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
Scn2bQ56A07 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
Scn2bQ56A07 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
Scn2bQ56A07 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25.98■■□□□ 1.75
Scn2bQ56A07 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Scn2bQ56A07 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.93■■□□□ 1.74
Scn2bQ56A07 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Scn2bQ56A07 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Scn2bQ56A07 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
Scn2bQ56A07 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
Scn2bQ56A07 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.89■■□□□ 1.73
Scn2bQ56A07 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Scn2bQ56A07 Gm26115-201ENSMUST00000175605 87 ntBASIC25.85■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms