Protein–RNA interactions for Protein: Q56A06

Tmtc2, Transmembrane and TPR repeat-containing protein 2, mousemouse

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmtc2Q56A06 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.31■■■□□ 2.76
Tmtc2Q56A06 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC32.31■■■□□ 2.76
Tmtc2Q56A06 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Tmtc2Q56A06 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.25■■■□□ 2.75
Tmtc2Q56A06 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
Tmtc2Q56A06 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
Tmtc2Q56A06 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC32.22■■■□□ 2.75
Tmtc2Q56A06 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
Tmtc2Q56A06 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.2■■■□□ 2.75
Tmtc2Q56A06 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC32.19■■■□□ 2.74
Tmtc2Q56A06 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Tmtc2Q56A06 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC32.13■■■□□ 2.73
Tmtc2Q56A06 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Tmtc2Q56A06 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.09■■■□□ 2.73
Tmtc2Q56A06 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.03■■■□□ 2.72
Tmtc2Q56A06 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Tmtc2Q56A06 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Tmtc2Q56A06 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32■■■□□ 2.71
Tmtc2Q56A06 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Tmtc2Q56A06 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Tmtc2Q56A06 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Tmtc2Q56A06 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC31.9■■■□□ 2.7
Tmtc2Q56A06 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Tmtc2Q56A06 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Tmtc2Q56A06 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC31.84■■■□□ 2.69
Tmtc2Q56A06 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC31.83■■■□□ 2.69
Tmtc2Q56A06 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
Tmtc2Q56A06 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Tmtc2Q56A06 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Tmtc2Q56A06 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Tmtc2Q56A06 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
Tmtc2Q56A06 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Tmtc2Q56A06 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC31.65■■■□□ 2.66
Tmtc2Q56A06 Zfp131-207ENSMUST00000224946 1783 ntBASIC31.64■■■□□ 2.66
Tmtc2Q56A06 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC31.61■■■□□ 2.65
Tmtc2Q56A06 Gm26115-201ENSMUST00000175605 87 ntBASIC31.58■■■□□ 2.65
Tmtc2Q56A06 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Tmtc2Q56A06 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC31.55■■■□□ 2.64
Tmtc2Q56A06 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Tmtc2Q56A06 Gm17082-201ENSMUST00000166043 1091 ntBASIC31.52■■■□□ 2.64
Tmtc2Q56A06 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
Tmtc2Q56A06 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Tmtc2Q56A06 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Tmtc2Q56A06 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Tmtc2Q56A06 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Tmtc2Q56A06 Gm8109-201ENSMUST00000194076 746 ntBASIC31.43■■■□□ 2.62
Tmtc2Q56A06 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Tmtc2Q56A06 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Tmtc2Q56A06 Gm27322-201ENSMUST00000184007 104 ntBASIC31.39■■■□□ 2.62
Tmtc2Q56A06 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC31.39■■■□□ 2.62
Tmtc2Q56A06 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Tmtc2Q56A06 AL845457.1-201ENSMUST00000197244 68 ntBASIC31.36■■■□□ 2.61
Tmtc2Q56A06 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC31.34■■■□□ 2.61
Tmtc2Q56A06 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.34■■■□□ 2.61
Tmtc2Q56A06 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Tmtc2Q56A06 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Tmtc2Q56A06 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.29■■■□□ 2.6
Tmtc2Q56A06 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tmtc2Q56A06 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Tmtc2Q56A06 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Tmtc2Q56A06 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Tmtc2Q56A06 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Tmtc2Q56A06 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Tmtc2Q56A06 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Tmtc2Q56A06 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
Tmtc2Q56A06 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
Tmtc2Q56A06 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Tmtc2Q56A06 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Tmtc2Q56A06 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.08■■■□□ 2.57
Tmtc2Q56A06 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tmtc2Q56A06 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tmtc2Q56A06 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Tmtc2Q56A06 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.04■■■□□ 2.56
Tmtc2Q56A06 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
Tmtc2Q56A06 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
Tmtc2Q56A06 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.99■■■□□ 2.55
Tmtc2Q56A06 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tmtc2Q56A06 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.54
Tmtc2Q56A06 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC30.94■■■□□ 2.54
Tmtc2Q56A06 Mipep-204ENSMUST00000225043 1548 ntBASIC30.93■■■□□ 2.54
Tmtc2Q56A06 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Tmtc2Q56A06 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Tmtc2Q56A06 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Tmtc2Q56A06 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Tmtc2Q56A06 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
Tmtc2Q56A06 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Tmtc2Q56A06 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Tmtc2Q56A06 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
Tmtc2Q56A06 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Tmtc2Q56A06 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
Tmtc2Q56A06 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Tmtc2Q56A06 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Tmtc2Q56A06 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
Tmtc2Q56A06 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC30.68■■■□□ 2.5
Tmtc2Q56A06 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Tmtc2Q56A06 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC30.64■■■□□ 2.5
Tmtc2Q56A06 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Tmtc2Q56A06 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Tmtc2Q56A06 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Tmtc2Q56A06 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC30.55■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms