Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
R3hdm4Q4VBF2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
R3hdm4Q4VBF2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC30.31■■■□□ 2.44
R3hdm4Q4VBF2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC30.26■■■□□ 2.43
R3hdm4Q4VBF2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
R3hdm4Q4VBF2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
R3hdm4Q4VBF2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
R3hdm4Q4VBF2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.21■■■□□ 2.43
R3hdm4Q4VBF2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
R3hdm4Q4VBF2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
R3hdm4Q4VBF2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC30.13■■■□□ 2.41
R3hdm4Q4VBF2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
R3hdm4Q4VBF2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
R3hdm4Q4VBF2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
R3hdm4Q4VBF2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC30.06■■■□□ 2.4
R3hdm4Q4VBF2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30.06■■■□□ 2.4
R3hdm4Q4VBF2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.4
R3hdm4Q4VBF2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
R3hdm4Q4VBF2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
R3hdm4Q4VBF2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.92■■■□□ 2.38
R3hdm4Q4VBF2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
R3hdm4Q4VBF2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
R3hdm4Q4VBF2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
R3hdm4Q4VBF2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.83■■■□□ 2.37
R3hdm4Q4VBF2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
R3hdm4Q4VBF2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.81■■■□□ 2.36
R3hdm4Q4VBF2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
R3hdm4Q4VBF2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.75■■■□□ 2.35
R3hdm4Q4VBF2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
R3hdm4Q4VBF2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
R3hdm4Q4VBF2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.69■■■□□ 2.34
R3hdm4Q4VBF2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.68■■■□□ 2.34
R3hdm4Q4VBF2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
R3hdm4Q4VBF2 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.64■■■□□ 2.34
R3hdm4Q4VBF2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.64■■■□□ 2.34
R3hdm4Q4VBF2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC29.61■■■□□ 2.33
R3hdm4Q4VBF2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
R3hdm4Q4VBF2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
R3hdm4Q4VBF2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
R3hdm4Q4VBF2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
R3hdm4Q4VBF2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
R3hdm4Q4VBF2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
R3hdm4Q4VBF2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
R3hdm4Q4VBF2 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.48■■■□□ 2.31
R3hdm4Q4VBF2 Gm26115-201ENSMUST00000175605 87 ntBASIC29.48■■■□□ 2.31
R3hdm4Q4VBF2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
R3hdm4Q4VBF2 Gm8109-201ENSMUST00000194076 746 ntBASIC29.44■■■□□ 2.3
R3hdm4Q4VBF2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
R3hdm4Q4VBF2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
R3hdm4Q4VBF2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
R3hdm4Q4VBF2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
R3hdm4Q4VBF2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC29.39■■■□□ 2.3
R3hdm4Q4VBF2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
R3hdm4Q4VBF2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
R3hdm4Q4VBF2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
R3hdm4Q4VBF2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
R3hdm4Q4VBF2 AL845457.1-201ENSMUST00000197244 68 ntBASIC29.34■■■□□ 2.29
R3hdm4Q4VBF2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
R3hdm4Q4VBF2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC29.31■■■□□ 2.28
R3hdm4Q4VBF2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
R3hdm4Q4VBF2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
R3hdm4Q4VBF2 Gm27322-201ENSMUST00000184007 104 ntBASIC29.27■■■□□ 2.28
R3hdm4Q4VBF2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.26■■■□□ 2.27
R3hdm4Q4VBF2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
R3hdm4Q4VBF2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
R3hdm4Q4VBF2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
R3hdm4Q4VBF2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC29.17■■■□□ 2.26
R3hdm4Q4VBF2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
R3hdm4Q4VBF2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
R3hdm4Q4VBF2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
R3hdm4Q4VBF2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC29.1■■■□□ 2.25
R3hdm4Q4VBF2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC29.07■■■□□ 2.24
R3hdm4Q4VBF2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
R3hdm4Q4VBF2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
R3hdm4Q4VBF2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
R3hdm4Q4VBF2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
R3hdm4Q4VBF2 AC166822.3-201ENSMUST00000227394 661 ntBASIC28.97■■■□□ 2.23
R3hdm4Q4VBF2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.95■■■□□ 2.22
R3hdm4Q4VBF2 Mipep-204ENSMUST00000225043 1548 ntBASIC28.93■■■□□ 2.22
R3hdm4Q4VBF2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
R3hdm4Q4VBF2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC28.93■■■□□ 2.22
R3hdm4Q4VBF2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC28.92■■■□□ 2.22
R3hdm4Q4VBF2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
R3hdm4Q4VBF2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
R3hdm4Q4VBF2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
R3hdm4Q4VBF2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
R3hdm4Q4VBF2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
R3hdm4Q4VBF2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
R3hdm4Q4VBF2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
R3hdm4Q4VBF2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
R3hdm4Q4VBF2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
R3hdm4Q4VBF2 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
R3hdm4Q4VBF2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
R3hdm4Q4VBF2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
R3hdm4Q4VBF2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
R3hdm4Q4VBF2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
R3hdm4Q4VBF2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC28.7■■■□□ 2.18
R3hdm4Q4VBF2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
R3hdm4Q4VBF2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC28.68■■■□□ 2.18
R3hdm4Q4VBF2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC28.65■■■□□ 2.18
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms