Protein–RNA interactions for Protein: Q3UQS2

Lsmem1, Leucine-rich single-pass membrane protein 1, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsmem1Q3UQS2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.51■■■□□ 2.15
Lsmem1Q3UQS2 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Lsmem1Q3UQS2 Gm25262-201ENSMUST00000174934 133 ntBASIC28.49■■■□□ 2.15
Lsmem1Q3UQS2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Lsmem1Q3UQS2 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.47■■■□□ 2.15
Lsmem1Q3UQS2 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Lsmem1Q3UQS2 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
Lsmem1Q3UQS2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.45■■■□□ 2.14
Lsmem1Q3UQS2 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Lsmem1Q3UQS2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.33■■■□□ 2.13
Lsmem1Q3UQS2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Lsmem1Q3UQS2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Lsmem1Q3UQS2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC28.29■■■□□ 2.12
Lsmem1Q3UQS2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Lsmem1Q3UQS2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC28.27■■■□□ 2.12
Lsmem1Q3UQS2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Lsmem1Q3UQS2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Lsmem1Q3UQS2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC28.22■■■□□ 2.11
Lsmem1Q3UQS2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Lsmem1Q3UQS2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Lsmem1Q3UQS2 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Lsmem1Q3UQS2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Lsmem1Q3UQS2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Lsmem1Q3UQS2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Lsmem1Q3UQS2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Lsmem1Q3UQS2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
Lsmem1Q3UQS2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28■■■□□ 2.07
Lsmem1Q3UQS2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
Lsmem1Q3UQS2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC27.96■■■□□ 2.07
Lsmem1Q3UQS2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC27.94■■■□□ 2.06
Lsmem1Q3UQS2 Zfp131-207ENSMUST00000224946 1783 ntBASIC27.91■■■□□ 2.06
Lsmem1Q3UQS2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Lsmem1Q3UQS2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.89■■■□□ 2.06
Lsmem1Q3UQS2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.89■■■□□ 2.06
Lsmem1Q3UQS2 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Lsmem1Q3UQS2 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Lsmem1Q3UQS2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC27.84■■■□□ 2.05
Lsmem1Q3UQS2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Lsmem1Q3UQS2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Lsmem1Q3UQS2 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
Lsmem1Q3UQS2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Lsmem1Q3UQS2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC27.76■■■□□ 2.04
Lsmem1Q3UQS2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Lsmem1Q3UQS2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
Lsmem1Q3UQS2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.71■■■□□ 2.03
Lsmem1Q3UQS2 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Lsmem1Q3UQS2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Lsmem1Q3UQS2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Lsmem1Q3UQS2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Lsmem1Q3UQS2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Lsmem1Q3UQS2 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.65■■■□□ 2.02
Lsmem1Q3UQS2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Lsmem1Q3UQS2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC27.64■■■□□ 2.01
Lsmem1Q3UQS2 Gm26115-201ENSMUST00000175605 87 ntBASIC27.6■■■□□ 2.01
Lsmem1Q3UQS2 AL845457.1-201ENSMUST00000197244 68 ntBASIC27.58■■■□□ 2.01
Lsmem1Q3UQS2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Lsmem1Q3UQS2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.54■■■□□ 2
Lsmem1Q3UQS2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
Lsmem1Q3UQS2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Lsmem1Q3UQS2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Lsmem1Q3UQS2 Gm8109-201ENSMUST00000194076 746 ntBASIC27.51■■□□□ 1.99
Lsmem1Q3UQS2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.5■■□□□ 1.99
Lsmem1Q3UQS2 Gm27322-201ENSMUST00000184007 104 ntBASIC27.5■■□□□ 1.99
Lsmem1Q3UQS2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
Lsmem1Q3UQS2 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC27.48■■□□□ 1.99
Lsmem1Q3UQS2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Lsmem1Q3UQS2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Lsmem1Q3UQS2 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
Lsmem1Q3UQS2 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC27.45■■□□□ 1.98
Lsmem1Q3UQS2 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Lsmem1Q3UQS2 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Lsmem1Q3UQS2 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.38■■□□□ 1.97
Lsmem1Q3UQS2 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC27.37■■□□□ 1.97
Lsmem1Q3UQS2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Lsmem1Q3UQS2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Lsmem1Q3UQS2 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.33■■□□□ 1.97
Lsmem1Q3UQS2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Lsmem1Q3UQS2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
Lsmem1Q3UQS2 AC166822.3-201ENSMUST00000227394 661 ntBASIC27.25■■□□□ 1.95
Lsmem1Q3UQS2 Mipep-204ENSMUST00000225043 1548 ntBASIC27.23■■□□□ 1.95
Lsmem1Q3UQS2 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC27.22■■□□□ 1.95
Lsmem1Q3UQS2 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Lsmem1Q3UQS2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.21■■□□□ 1.95
Lsmem1Q3UQS2 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
Lsmem1Q3UQS2 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Lsmem1Q3UQS2 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Lsmem1Q3UQS2 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Lsmem1Q3UQS2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Lsmem1Q3UQS2 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
Lsmem1Q3UQS2 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
Lsmem1Q3UQS2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Lsmem1Q3UQS2 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Lsmem1Q3UQS2 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC27.04■■□□□ 1.92
Lsmem1Q3UQS2 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Lsmem1Q3UQS2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Lsmem1Q3UQS2 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Lsmem1Q3UQS2 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC27■■□□□ 1.91
Lsmem1Q3UQS2 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Lsmem1Q3UQS2 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Lsmem1Q3UQS2 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms