Protein–RNA interactions for Protein: Q3UHC1

Rapgef1, Rap guanine nucleotide exchange factor (GEF) 1, mousemouse

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef1Q3UHC1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Rapgef1Q3UHC1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC29.99■■■□□ 2.39
Rapgef1Q3UHC1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rapgef1Q3UHC1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rapgef1Q3UHC1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Rapgef1Q3UHC1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC29.95■■■□□ 2.38
Rapgef1Q3UHC1 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Rapgef1Q3UHC1 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC29.92■■■□□ 2.38
Rapgef1Q3UHC1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Rapgef1Q3UHC1 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Rapgef1Q3UHC1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Rapgef1Q3UHC1 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC29.87■■■□□ 2.37
Rapgef1Q3UHC1 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Rapgef1Q3UHC1 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Rapgef1Q3UHC1 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC29.77■■■□□ 2.36
Rapgef1Q3UHC1 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Rapgef1Q3UHC1 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC29.73■■■□□ 2.35
Rapgef1Q3UHC1 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
Rapgef1Q3UHC1 Gm26115-201ENSMUST00000175605 87 ntBASIC29.64■■■□□ 2.34
Rapgef1Q3UHC1 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Rapgef1Q3UHC1 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
Rapgef1Q3UHC1 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
Rapgef1Q3UHC1 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC29.6■■■□□ 2.33
Rapgef1Q3UHC1 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC29.59■■■□□ 2.33
Rapgef1Q3UHC1 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rapgef1Q3UHC1 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rapgef1Q3UHC1 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rapgef1Q3UHC1 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC29.5■■■□□ 2.31
Rapgef1Q3UHC1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.48■■■□□ 2.31
Rapgef1Q3UHC1 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
Rapgef1Q3UHC1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC29.42■■■□□ 2.3
Rapgef1Q3UHC1 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC29.39■■■□□ 2.3
Rapgef1Q3UHC1 Gm8109-201ENSMUST00000194076 746 ntBASIC29.38■■■□□ 2.29
Rapgef1Q3UHC1 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
Rapgef1Q3UHC1 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
Rapgef1Q3UHC1 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC29.35■■■□□ 2.29
Rapgef1Q3UHC1 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
Rapgef1Q3UHC1 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC29.33■■■□□ 2.29
Rapgef1Q3UHC1 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
Rapgef1Q3UHC1 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Rapgef1Q3UHC1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
Rapgef1Q3UHC1 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rapgef1Q3UHC1 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
Rapgef1Q3UHC1 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC29.27■■■□□ 2.28
Rapgef1Q3UHC1 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.26■■■□□ 2.27
Rapgef1Q3UHC1 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.24■■■□□ 2.27
Rapgef1Q3UHC1 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.24■■■□□ 2.27
Rapgef1Q3UHC1 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Rapgef1Q3UHC1 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Rapgef1Q3UHC1 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Rapgef1Q3UHC1 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC29.19■■■□□ 2.26
Rapgef1Q3UHC1 Zfp131-207ENSMUST00000224946 1783 ntBASIC29.19■■■□□ 2.26
Rapgef1Q3UHC1 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Rapgef1Q3UHC1 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC29.15■■■□□ 2.26
Rapgef1Q3UHC1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Rapgef1Q3UHC1 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Rapgef1Q3UHC1 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Rapgef1Q3UHC1 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
Rapgef1Q3UHC1 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Rapgef1Q3UHC1 Gm17082-201ENSMUST00000166043 1091 ntBASIC29.03■■■□□ 2.24
Rapgef1Q3UHC1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Rapgef1Q3UHC1 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Rapgef1Q3UHC1 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC28.96■■■□□ 2.23
Rapgef1Q3UHC1 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Rapgef1Q3UHC1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC28.93■■■□□ 2.22
Rapgef1Q3UHC1 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC28.91■■■□□ 2.22
Rapgef1Q3UHC1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.91■■■□□ 2.22
Rapgef1Q3UHC1 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Rapgef1Q3UHC1 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Rapgef1Q3UHC1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC28.85■■■□□ 2.21
Rapgef1Q3UHC1 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Rapgef1Q3UHC1 Gm27322-201ENSMUST00000184007 104 ntBASIC28.85■■■□□ 2.21
Rapgef1Q3UHC1 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC28.85■■■□□ 2.21
Rapgef1Q3UHC1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
Rapgef1Q3UHC1 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Rapgef1Q3UHC1 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
Rapgef1Q3UHC1 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
Rapgef1Q3UHC1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Rapgef1Q3UHC1 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Rapgef1Q3UHC1 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rapgef1Q3UHC1 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Rapgef1Q3UHC1 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Rapgef1Q3UHC1 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Rapgef1Q3UHC1 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rapgef1Q3UHC1 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rapgef1Q3UHC1 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
Rapgef1Q3UHC1 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Rapgef1Q3UHC1 AL845457.1-201ENSMUST00000197244 68 ntBASIC28.59■■■□□ 2.17
Rapgef1Q3UHC1 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC28.57■■■□□ 2.16
Rapgef1Q3UHC1 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
Rapgef1Q3UHC1 Gm2415-204ENSMUST00000190235 2004 ntBASIC28.55■■■□□ 2.16
Rapgef1Q3UHC1 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Rapgef1Q3UHC1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC28.53■■■□□ 2.16
Rapgef1Q3UHC1 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Rapgef1Q3UHC1 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Rapgef1Q3UHC1 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Rapgef1Q3UHC1 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC28.5■■■□□ 2.15
Rapgef1Q3UHC1 Gm24804-201ENSMUST00000174982 85 ntBASIC28.48■■■□□ 2.15
Rapgef1Q3UHC1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Rapgef1Q3UHC1 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms