Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rab4aP56371 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rab4aP56371 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rab4aP56371 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rab4aP56371 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rab4aP56371 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rab4aP56371 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rab4aP56371 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rab4aP56371 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab4aP56371 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rab4aP56371 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rab4aP56371 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rab4aP56371 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Rab4aP56371 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Rab4aP56371 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.04■□□□□ 0.96
Rab4aP56371 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Rab4aP56371 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Rab4aP56371 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Rab4aP56371 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Rab4aP56371 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
Rab4aP56371 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Rab4aP56371 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab4aP56371 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Rab4aP56371 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Rab4aP56371 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Rab4aP56371 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Rab4aP56371 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Rab4aP56371 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Rab4aP56371 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Rab4aP56371 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Rab4aP56371 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Rab4aP56371 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab4aP56371 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Rab4aP56371 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Rab4aP56371 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab4aP56371 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Rab4aP56371 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab4aP56371 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Rab4aP56371 CT025624.2-201ENSMUST00000223609 1909 ntBASIC20.8■□□□□ 0.92
Rab4aP56371 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Rab4aP56371 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab4aP56371 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Rab4aP56371 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Rab4aP56371 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Rab4aP56371 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Rab4aP56371 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rab4aP56371 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rab4aP56371 Gm24109-201ENSMUST00000175489 103 ntBASIC20.69■□□□□ 0.9
Rab4aP56371 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Rab4aP56371 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab4aP56371 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab4aP56371 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rab4aP56371 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rab4aP56371 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rab4aP56371 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.61■□□□□ 0.89
Rab4aP56371 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rab4aP56371 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rab4aP56371 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.6■□□□□ 0.89
Rab4aP56371 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Rab4aP56371 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rab4aP56371 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rab4aP56371 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab4aP56371 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rab4aP56371 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rab4aP56371 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rab4aP56371 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Rab4aP56371 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab4aP56371 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab4aP56371 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab4aP56371 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rab4aP56371 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.51■□□□□ 0.87
Rab4aP56371 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.51■□□□□ 0.87
Rab4aP56371 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab4aP56371 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab4aP56371 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Rab4aP56371 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab4aP56371 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Rab4aP56371 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab4aP56371 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab4aP56371 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab4aP56371 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rab4aP56371 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rab4aP56371 Gm23366-201ENSMUST00000175022 89 ntBASIC20.45■□□□□ 0.86
Rab4aP56371 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rab4aP56371 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab4aP56371 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rab4aP56371 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rab4aP56371 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rab4aP56371 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rab4aP56371 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
Rab4aP56371 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rab4aP56371 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rab4aP56371 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Rab4aP56371 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rab4aP56371 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rab4aP56371 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Rab4aP56371 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rab4aP56371 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rab4aP56371 AC153911.1-202ENSMUST00000218534 1034 ntBASIC20.33■□□□□ 0.85
Rab4aP56371 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms