Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.36■■□□□ 1.01
Ccl6P27784 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Ccl6P27784 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Ccl6P27784 Rab21-202ENSMUST00000218831 843 ntBASIC21.3■■□□□ 1
Ccl6P27784 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccl6P27784 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Ccl6P27784 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Ccl6P27784 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.24■□□□□ 0.99
Ccl6P27784 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Ccl6P27784 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Ccl6P27784 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.99
Ccl6P27784 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21.2■□□□□ 0.98
Ccl6P27784 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Ccl6P27784 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Ccl6P27784 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Ccl6P27784 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Ccl6P27784 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Ccl6P27784 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Ccl6P27784 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.06■□□□□ 0.96
Ccl6P27784 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Ccl6P27784 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21.02■□□□□ 0.95
Ccl6P27784 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Ccl6P27784 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Ccl6P27784 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21■□□□□ 0.95
Ccl6P27784 Gm25262-201ENSMUST00000174934 133 ntBASIC21■□□□□ 0.95
Ccl6P27784 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ccl6P27784 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ccl6P27784 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Ccl6P27784 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Ccl6P27784 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccl6P27784 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccl6P27784 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.93■□□□□ 0.94
Ccl6P27784 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ccl6P27784 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ccl6P27784 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccl6P27784 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Ccl6P27784 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ccl6P27784 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Ccl6P27784 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ccl6P27784 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ccl6P27784 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.86■□□□□ 0.93
Ccl6P27784 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ccl6P27784 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ccl6P27784 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ccl6P27784 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccl6P27784 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ccl6P27784 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ccl6P27784 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ccl6P27784 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ccl6P27784 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ccl6P27784 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Ccl6P27784 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ccl6P27784 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.66■□□□□ 0.9
Ccl6P27784 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ccl6P27784 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ccl6P27784 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ccl6P27784 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ccl6P27784 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ccl6P27784 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.56■□□□□ 0.88
Ccl6P27784 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.54■□□□□ 0.88
Ccl6P27784 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ccl6P27784 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.53■□□□□ 0.88
Ccl6P27784 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ccl6P27784 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.52■□□□□ 0.88
Ccl6P27784 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ccl6P27784 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ccl6P27784 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ccl6P27784 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ccl6P27784 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ccl6P27784 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Ccl6P27784 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.44■□□□□ 0.86
Ccl6P27784 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccl6P27784 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccl6P27784 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ccl6P27784 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ccl6P27784 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ccl6P27784 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.39■□□□□ 0.85
Ccl6P27784 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Ccl6P27784 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccl6P27784 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Ccl6P27784 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccl6P27784 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Ccl6P27784 Gm27322-201ENSMUST00000184007 104 ntBASIC20.36■□□□□ 0.85
Ccl6P27784 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccl6P27784 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccl6P27784 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Ccl6P27784 Mipep-204ENSMUST00000225043 1548 ntBASIC20.33■□□□□ 0.85
Ccl6P27784 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccl6P27784 Gm26115-201ENSMUST00000175605 87 ntBASIC20.32■□□□□ 0.84
Ccl6P27784 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccl6P27784 Gm8109-201ENSMUST00000194076 746 ntBASIC20.31■□□□□ 0.84
Ccl6P27784 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.3■□□□□ 0.84
Ccl6P27784 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccl6P27784 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccl6P27784 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccl6P27784 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Ccl6P27784 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl6P27784 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccl6P27784 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccl6P27784 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms