Protein–RNA interactions for Protein: P27784

Ccl6, C-C motif chemokine 6, mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl6P27784 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21,36■■□□□ 1,01
Ccl6P27784 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21,33■■□□□ 1,01
Ccl6P27784 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC21,31■■□□□ 1
Ccl6P27784 Rab21-202ENSMUST00000218831 843 ntBASIC21,3■■□□□ 1
Ccl6P27784 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Ccl6P27784 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC21,29■■□□□ 1
Ccl6P27784 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC21,25■□□□□ 0,99
Ccl6P27784 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21,24■□□□□ 0,99
Ccl6P27784 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC21,23■□□□□ 0,99
Ccl6P27784 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21,21■□□□□ 0,99
Ccl6P27784 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC21,2■□□□□ 0,99
Ccl6P27784 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC21,2■□□□□ 0,98
Ccl6P27784 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21,14■□□□□ 0,98
Ccl6P27784 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC21,13■□□□□ 0,97
Ccl6P27784 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC21,13■□□□□ 0,97
Ccl6P27784 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21,12■□□□□ 0,97
Ccl6P27784 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC21,09■□□□□ 0,97
Ccl6P27784 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21,07■□□□□ 0,96
Ccl6P27784 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21,06■□□□□ 0,96
Ccl6P27784 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC21,04■□□□□ 0,96
Ccl6P27784 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC21,02■□□□□ 0,95
Ccl6P27784 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21,01■□□□□ 0,95
Ccl6P27784 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21,01■□□□□ 0,95
Ccl6P27784 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC21■□□□□ 0,95
Ccl6P27784 Gm25262-201ENSMUST00000174934 133 ntBASIC21■□□□□ 0,95
Ccl6P27784 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20,96■□□□□ 0,95
Ccl6P27784 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20,95■□□□□ 0,94
Ccl6P27784 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20,95■□□□□ 0,94
Ccl6P27784 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20,94■□□□□ 0,94
Ccl6P27784 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20,93■□□□□ 0,94
Ccl6P27784 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20,93■□□□□ 0,94
Ccl6P27784 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20,93■□□□□ 0,94
Ccl6P27784 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20,93■□□□□ 0,94
Ccl6P27784 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20,92■□□□□ 0,94
Ccl6P27784 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20,91■□□□□ 0,94
Ccl6P27784 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20,91■□□□□ 0,94
Ccl6P27784 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20,91■□□□□ 0,94
Ccl6P27784 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20,89■□□□□ 0,94
Ccl6P27784 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20,89■□□□□ 0,93
Ccl6P27784 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20,88■□□□□ 0,93
Ccl6P27784 Zfp131-207ENSMUST00000224946 1783 ntBASIC20,86■□□□□ 0,93
Ccl6P27784 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20,84■□□□□ 0,93
Ccl6P27784 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20,83■□□□□ 0,92
Ccl6P27784 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20,81■□□□□ 0,92
Ccl6P27784 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC20,79■□□□□ 0,92
Ccl6P27784 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20,79■□□□□ 0,92
Ccl6P27784 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20,78■□□□□ 0,92
Ccl6P27784 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20,76■□□□□ 0,91
Ccl6P27784 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20,73■□□□□ 0,91
Ccl6P27784 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20,72■□□□□ 0,91
Ccl6P27784 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20,7■□□□□ 0,9
Ccl6P27784 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20,68■□□□□ 0,9
Ccl6P27784 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20,66■□□□□ 0,9
Ccl6P27784 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20,62■□□□□ 0,89
Ccl6P27784 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20,62■□□□□ 0,89
Ccl6P27784 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20,61■□□□□ 0,89
Ccl6P27784 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20,6■□□□□ 0,89
Ccl6P27784 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20,56■□□□□ 0,88
Ccl6P27784 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20,56■□□□□ 0,88
Ccl6P27784 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20,54■□□□□ 0,88
Ccl6P27784 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20,53■□□□□ 0,88
Ccl6P27784 AL845457.1-201ENSMUST00000197244 68 ntBASIC20,53■□□□□ 0,88
Ccl6P27784 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20,52■□□□□ 0,88
Ccl6P27784 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20,52■□□□□ 0,88
Ccl6P27784 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20,5■□□□□ 0,87
Ccl6P27784 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20,49■□□□□ 0,87
Ccl6P27784 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20,48■□□□□ 0,87
Ccl6P27784 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20,46■□□□□ 0,87
Ccl6P27784 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20,45■□□□□ 0,86
Ccl6P27784 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20,45■□□□□ 0,86
Ccl6P27784 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20,44■□□□□ 0,86
Ccl6P27784 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20,43■□□□□ 0,86
Ccl6P27784 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20,43■□□□□ 0,86
Ccl6P27784 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20,43■□□□□ 0,86
Ccl6P27784 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20,42■□□□□ 0,86
Ccl6P27784 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20,4■□□□□ 0,86
Ccl6P27784 Gm17082-201ENSMUST00000166043 1091 ntBASIC20,39■□□□□ 0,85
Ccl6P27784 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20,38■□□□□ 0,85
Ccl6P27784 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20,38■□□□□ 0,85
Ccl6P27784 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20,37■□□□□ 0,85
Ccl6P27784 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20,37■□□□□ 0,85
Ccl6P27784 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20,36■□□□□ 0,85
Ccl6P27784 Gm27322-201ENSMUST00000184007 104 ntBASIC20,36■□□□□ 0,85
Ccl6P27784 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20,35■□□□□ 0,85
Ccl6P27784 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20,34■□□□□ 0,85
Ccl6P27784 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20,33■□□□□ 0,85
Ccl6P27784 Mipep-204ENSMUST00000225043 1548 ntBASIC20,33■□□□□ 0,85
Ccl6P27784 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20,32■□□□□ 0,84
Ccl6P27784 Gm26115-201ENSMUST00000175605 87 ntBASIC20,32■□□□□ 0,84
Ccl6P27784 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20,31■□□□□ 0,84
Ccl6P27784 Gm8109-201ENSMUST00000194076 746 ntBASIC20,31■□□□□ 0,84
Ccl6P27784 Gm2415-204ENSMUST00000190235 2004 ntBASIC20,3■□□□□ 0,84
Ccl6P27784 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20,29■□□□□ 0,84
Ccl6P27784 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20,29■□□□□ 0,84
Ccl6P27784 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20,28■□□□□ 0,84
Ccl6P27784 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20,27■□□□□ 0,84
Ccl6P27784 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20,25■□□□□ 0,83
Ccl6P27784 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20,25■□□□□ 0,83
Ccl6P27784 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20,24■□□□□ 0,83
Ccl6P27784 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20,23■□□□□ 0,83
Retrieved 100 of 76,532 protein–RNA pairs in 15,9 ms