Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P06328 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.11■□□□□ 0.81
P06328 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.09■□□□□ 0.81
P06328 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
P06328 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P06328 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
P06328 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06328 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.02■□□□□ 0.79
P06328 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P06328 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06328 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
P06328 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P06328 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.88■□□□□ 0.77
P06328 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P06328 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P06328 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.88■□□□□ 0.77
P06328 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P06328 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P06328 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
P06328 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P06328 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.81■□□□□ 0.76
P06328 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
P06328 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P06328 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.78■□□□□ 0.76
P06328 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P06328 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
P06328 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
P06328 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
P06328 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P06328 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
P06328 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.69■□□□□ 0.74
P06328 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
P06328 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.67■□□□□ 0.74
P06328 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
P06328 Rab21-202ENSMUST00000218831 843 ntBASIC19.62■□□□□ 0.73
P06328 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
P06328 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P06328 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
P06328 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
P06328 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
P06328 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
P06328 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P06328 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P06328 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
P06328 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P06328 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.52■□□□□ 0.71
P06328 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P06328 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P06328 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.49■□□□□ 0.71
P06328 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.48■□□□□ 0.71
P06328 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
P06328 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
P06328 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P06328 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.47■□□□□ 0.71
P06328 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.47■□□□□ 0.71
P06328 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P06328 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
P06328 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P06328 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
P06328 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.43■□□□□ 0.7
P06328 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
P06328 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P06328 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P06328 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P06328 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P06328 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P06328 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
P06328 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P06328 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P06328 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
P06328 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P06328 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.34■□□□□ 0.69
P06328 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.33■□□□□ 0.68
P06328 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
P06328 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06328 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.28■□□□□ 0.68
P06328 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.27■□□□□ 0.68
P06328 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P06328 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06328 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P06328 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.23■□□□□ 0.67
P06328 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06328 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06328 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
P06328 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06328 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P06328 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P06328 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P06328 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P06328 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06328 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P06328 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
P06328 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.13■□□□□ 0.65
P06328 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
P06328 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
P06328 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P06328 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
P06328 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06328 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06328 Mipep-204ENSMUST00000225043 1548 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms