Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
P06328 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC20.11■□□□□ 0.81
P06328 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.09■□□□□ 0.81
P06328 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
P06328 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
P06328 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
P06328 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
P06328 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.02■□□□□ 0.79
P06328 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
P06328 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
P06328 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
P06328 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
P06328 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.88■□□□□ 0.77
P06328 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
P06328 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P06328 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.88■□□□□ 0.77
P06328 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P06328 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P06328 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
P06328 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P06328 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.81■□□□□ 0.76
P06328 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
P06328 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P06328 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.78■□□□□ 0.76
P06328 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P06328 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
P06328 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
P06328 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
P06328 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
P06328 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
P06328 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.69■□□□□ 0.74
P06328 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
P06328 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.67■□□□□ 0.74
P06328 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
P06328 Rab21-202ENSMUST00000218831 843 ntBASIC19.62■□□□□ 0.73
P06328 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
P06328 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
P06328 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
P06328 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
P06328 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
P06328 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
P06328 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P06328 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
P06328 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
P06328 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
P06328 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.52■□□□□ 0.71
P06328 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P06328 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
P06328 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.49■□□□□ 0.71
P06328 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.48■□□□□ 0.71
P06328 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
P06328 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
P06328 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
P06328 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.47■□□□□ 0.71
P06328 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.47■□□□□ 0.71
P06328 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
P06328 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
P06328 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
P06328 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
P06328 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.43■□□□□ 0.7
P06328 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
P06328 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P06328 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
P06328 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
P06328 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
P06328 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
P06328 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
P06328 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
P06328 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
P06328 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
P06328 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
P06328 Gm6658-202ENSMUST00000209493 1885 ntBASIC19.34■□□□□ 0.69
P06328 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC19.33■□□□□ 0.68
P06328 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
P06328 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
P06328 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC19.28■□□□□ 0.68
P06328 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.27■□□□□ 0.68
P06328 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
P06328 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
P06328 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
P06328 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.23■□□□□ 0.67
P06328 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06328 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
P06328 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
P06328 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
P06328 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
P06328 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P06328 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P06328 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
P06328 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
P06328 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
P06328 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
P06328 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.13■□□□□ 0.65
P06328 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
P06328 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
P06328 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
P06328 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
P06328 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06328 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
P06328 Mipep-204ENSMUST00000225043 1548 ntBASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms