Protein–RNA interactions for Protein: O88343

Slc4a4, Electrogenic sodium bicarbonate cotransporter 1, mousemouse

Predictions only

Length 1,079 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc4a4O88343 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC33.22■■■□□ 2.91
Slc4a4O88343 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC33.19■■■□□ 2.9
Slc4a4O88343 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC33.19■■■□□ 2.9
Slc4a4O88343 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC33.19■■■□□ 2.9
Slc4a4O88343 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC33.18■■■□□ 2.9
Slc4a4O88343 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
Slc4a4O88343 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC33.11■■■□□ 2.89
Slc4a4O88343 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
Slc4a4O88343 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
Slc4a4O88343 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC33.08■■■□□ 2.89
Slc4a4O88343 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
Slc4a4O88343 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Slc4a4O88343 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.99■■■□□ 2.87
Slc4a4O88343 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC32.98■■■□□ 2.87
Slc4a4O88343 Gm26115-201ENSMUST00000175605 87 ntBASIC32.95■■■□□ 2.87
Slc4a4O88343 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC32.95■■■□□ 2.86
Slc4a4O88343 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC32.84■■■□□ 2.85
Slc4a4O88343 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC32.84■■■□□ 2.85
Slc4a4O88343 Gm8109-201ENSMUST00000194076 746 ntBASIC32.83■■■□□ 2.85
Slc4a4O88343 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
Slc4a4O88343 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Slc4a4O88343 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Slc4a4O88343 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
Slc4a4O88343 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Slc4a4O88343 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC32.7■■■□□ 2.83
Slc4a4O88343 Gm17082-201ENSMUST00000166043 1091 ntBASIC32.67■■■□□ 2.82
Slc4a4O88343 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Slc4a4O88343 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC32.64■■■□□ 2.82
Slc4a4O88343 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Slc4a4O88343 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
Slc4a4O88343 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Slc4a4O88343 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Slc4a4O88343 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Slc4a4O88343 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC32.51■■■□□ 2.79
Slc4a4O88343 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Slc4a4O88343 Gm27322-201ENSMUST00000184007 104 ntBASIC32.48■■■□□ 2.79
Slc4a4O88343 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC32.45■■■□□ 2.79
Slc4a4O88343 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
Slc4a4O88343 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
Slc4a4O88343 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
Slc4a4O88343 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Slc4a4O88343 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.4■■■□□ 2.78
Slc4a4O88343 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC32.38■■■□□ 2.77
Slc4a4O88343 Zfp131-207ENSMUST00000224946 1783 ntBASIC32.36■■■□□ 2.77
Slc4a4O88343 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
Slc4a4O88343 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Slc4a4O88343 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Slc4a4O88343 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC32.26■■■□□ 2.76
Slc4a4O88343 AL845457.1-201ENSMUST00000197244 68 ntBASIC32.26■■■□□ 2.75
Slc4a4O88343 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Slc4a4O88343 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC32.26■■■□□ 2.75
Slc4a4O88343 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Slc4a4O88343 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Slc4a4O88343 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
Slc4a4O88343 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC32.04■■■□□ 2.72
Slc4a4O88343 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC32■■■□□ 2.71
Slc4a4O88343 AC166822.3-201ENSMUST00000227394 661 ntBASIC32■■■□□ 2.71
Slc4a4O88343 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Slc4a4O88343 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Slc4a4O88343 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Slc4a4O88343 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Slc4a4O88343 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Slc4a4O88343 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Slc4a4O88343 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Slc4a4O88343 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.69
Slc4a4O88343 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC31.88■■■□□ 2.69
Slc4a4O88343 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Slc4a4O88343 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Slc4a4O88343 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC31.87■■■□□ 2.69
Slc4a4O88343 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Slc4a4O88343 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Slc4a4O88343 Gm24804-201ENSMUST00000174982 85 ntBASIC31.82■■■□□ 2.68
Slc4a4O88343 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
Slc4a4O88343 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
Slc4a4O88343 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.68
Slc4a4O88343 Mipep-204ENSMUST00000225043 1548 ntBASIC31.7■■■□□ 2.67
Slc4a4O88343 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
Slc4a4O88343 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC31.7■■■□□ 2.67
Slc4a4O88343 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC31.69■■■□□ 2.66
Slc4a4O88343 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
Slc4a4O88343 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Slc4a4O88343 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Slc4a4O88343 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Slc4a4O88343 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
Slc4a4O88343 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Slc4a4O88343 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Slc4a4O88343 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Slc4a4O88343 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Slc4a4O88343 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Slc4a4O88343 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Slc4a4O88343 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Slc4a4O88343 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Slc4a4O88343 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Slc4a4O88343 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Slc4a4O88343 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC31.44■■■□□ 2.62
Slc4a4O88343 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Slc4a4O88343 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Slc4a4O88343 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
Slc4a4O88343 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC31.38■■■□□ 2.61
Slc4a4O88343 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 9.5 ms