Protein–RNA interactions for Protein: O55242

Sigmar1, Sigma non-opioid intracellular receptor 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sigmar1O55242 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sigmar1O55242 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sigmar1O55242 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC18.58■□□□□ 0.57
Sigmar1O55242 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sigmar1O55242 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sigmar1O55242 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Sigmar1O55242 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Sigmar1O55242 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Sigmar1O55242 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Sigmar1O55242 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Sigmar1O55242 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC18.5■□□□□ 0.55
Sigmar1O55242 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
Sigmar1O55242 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC18.48■□□□□ 0.55
Sigmar1O55242 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Sigmar1O55242 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sigmar1O55242 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Sigmar1O55242 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Sigmar1O55242 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Sigmar1O55242 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Sigmar1O55242 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Sigmar1O55242 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Sigmar1O55242 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Sigmar1O55242 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sigmar1O55242 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Sigmar1O55242 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Sigmar1O55242 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Sigmar1O55242 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sigmar1O55242 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sigmar1O55242 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.32■□□□□ 0.52
Sigmar1O55242 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sigmar1O55242 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Sigmar1O55242 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sigmar1O55242 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Sigmar1O55242 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sigmar1O55242 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC18.3■□□□□ 0.52
Sigmar1O55242 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sigmar1O55242 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sigmar1O55242 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sigmar1O55242 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sigmar1O55242 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sigmar1O55242 Gm15045-201ENSMUST00000117359 883 ntBASIC18.27■□□□□ 0.52
Sigmar1O55242 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sigmar1O55242 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Sigmar1O55242 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Sigmar1O55242 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Sigmar1O55242 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Sigmar1O55242 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Sigmar1O55242 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC18.23■□□□□ 0.51
Sigmar1O55242 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Sigmar1O55242 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Sigmar1O55242 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Sigmar1O55242 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sigmar1O55242 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sigmar1O55242 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Sigmar1O55242 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Sigmar1O55242 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Sigmar1O55242 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Sigmar1O55242 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Sigmar1O55242 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Sigmar1O55242 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sigmar1O55242 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Sigmar1O55242 Gm9905-201ENSMUST00000065740 1845 ntBASIC18.1■□□□□ 0.49
Sigmar1O55242 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Sigmar1O55242 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sigmar1O55242 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sigmar1O55242 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Sigmar1O55242 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Sigmar1O55242 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.06■□□□□ 0.48
Sigmar1O55242 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sigmar1O55242 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Sigmar1O55242 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Sigmar1O55242 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sigmar1O55242 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Sigmar1O55242 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sigmar1O55242 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sigmar1O55242 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sigmar1O55242 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sigmar1O55242 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sigmar1O55242 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Sigmar1O55242 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sigmar1O55242 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sigmar1O55242 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sigmar1O55242 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sigmar1O55242 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sigmar1O55242 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Sigmar1O55242 Gm6206-201ENSMUST00000133472 2199 ntBASIC17.97■□□□□ 0.47
Sigmar1O55242 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sigmar1O55242 CT025624.2-201ENSMUST00000223609 1909 ntBASIC17.96■□□□□ 0.47
Sigmar1O55242 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sigmar1O55242 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sigmar1O55242 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sigmar1O55242 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sigmar1O55242 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Sigmar1O55242 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Sigmar1O55242 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Sigmar1O55242 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sigmar1O55242 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Sigmar1O55242 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Sigmar1O55242 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Sigmar1O55242 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms