Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27,02■■□□□ 1,92
Gm28043E0CXC2 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1,91
Gm28043E0CXC2 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26,99■■□□□ 1,91
Gm28043E0CXC2 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26,98■■□□□ 1,91
Gm28043E0CXC2 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26,94■■□□□ 1,9
Gm28043E0CXC2 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC26,94■■□□□ 1,9
Gm28043E0CXC2 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26,93■■□□□ 1,9
Gm28043E0CXC2 Rab21-202ENSMUST00000218831 843 ntBASIC26,93■■□□□ 1,9
Gm28043E0CXC2 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC26,92■■□□□ 1,9
Gm28043E0CXC2 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC26,82■■□□□ 1,88
Gm28043E0CXC2 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26,81■■□□□ 1,88
Gm28043E0CXC2 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC26,8■■□□□ 1,88
Gm28043E0CXC2 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC26,78■■□□□ 1,88
Gm28043E0CXC2 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26,77■■□□□ 1,88
Gm28043E0CXC2 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC26,77■■□□□ 1,88
Gm28043E0CXC2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26,77■■□□□ 1,88
Gm28043E0CXC2 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26,74■■□□□ 1,87
Gm28043E0CXC2 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26,72■■□□□ 1,87
Gm28043E0CXC2 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26,7■■□□□ 1,86
Gm28043E0CXC2 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC26,69■■□□□ 1,86
Gm28043E0CXC2 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
Gm28043E0CXC2 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC26,66■■□□□ 1,86
Gm28043E0CXC2 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC26,65■■□□□ 1,86
Gm28043E0CXC2 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC26,64■■□□□ 1,86
Gm28043E0CXC2 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC26,63■■□□□ 1,85
Gm28043E0CXC2 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC26,62■■□□□ 1,85
Gm28043E0CXC2 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC26,62■■□□□ 1,85
Gm28043E0CXC2 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC26,6■■□□□ 1,85
Gm28043E0CXC2 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26,59■■□□□ 1,85
Gm28043E0CXC2 Gm25262-201ENSMUST00000174934 133 ntBASIC26,58■■□□□ 1,85
Gm28043E0CXC2 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC26,58■■□□□ 1,85
Gm28043E0CXC2 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC26,51■■□□□ 1,84
Gm28043E0CXC2 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC26,51■■□□□ 1,83
Gm28043E0CXC2 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26,51■■□□□ 1,83
Gm28043E0CXC2 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26,47■■□□□ 1,83
Gm28043E0CXC2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26,47■■□□□ 1,83
Gm28043E0CXC2 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Gm28043E0CXC2 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Gm28043E0CXC2 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26,44■■□□□ 1,82
Gm28043E0CXC2 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC26,42■■□□□ 1,82
Gm28043E0CXC2 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC26,42■■□□□ 1,82
Gm28043E0CXC2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26,42■■□□□ 1,82
Gm28043E0CXC2 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26,41■■□□□ 1,82
Gm28043E0CXC2 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC26,41■■□□□ 1,82
Gm28043E0CXC2 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Gm28043E0CXC2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Gm28043E0CXC2 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26,38■■□□□ 1,81
Gm28043E0CXC2 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC26,38■■□□□ 1,81
Gm28043E0CXC2 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC26,36■■□□□ 1,81
Gm28043E0CXC2 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26,34■■□□□ 1,81
Gm28043E0CXC2 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26,34■■□□□ 1,81
Gm28043E0CXC2 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26,32■■□□□ 1,8
Gm28043E0CXC2 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC26,27■■□□□ 1,8
Gm28043E0CXC2 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC26,24■■□□□ 1,79
Gm28043E0CXC2 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26,2■■□□□ 1,78
Gm28043E0CXC2 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC26,2■■□□□ 1,78
Gm28043E0CXC2 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26,17■■□□□ 1,78
Gm28043E0CXC2 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC26,16■■□□□ 1,78
Gm28043E0CXC2 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC26,15■■□□□ 1,78
Gm28043E0CXC2 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC26,15■■□□□ 1,78
Gm28043E0CXC2 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC26,14■■□□□ 1,78
Gm28043E0CXC2 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26,11■■□□□ 1,77
Gm28043E0CXC2 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26,09■■□□□ 1,77
Gm28043E0CXC2 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC26,09■■□□□ 1,77
Gm28043E0CXC2 Zfp131-207ENSMUST00000224946 1783 ntBASIC26,06■■□□□ 1,76
Gm28043E0CXC2 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC26,04■■□□□ 1,76
Gm28043E0CXC2 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC26,02■■□□□ 1,76
Gm28043E0CXC2 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC25,99■■□□□ 1,75
Gm28043E0CXC2 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25,96■■□□□ 1,75
Gm28043E0CXC2 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25,96■■□□□ 1,75
Gm28043E0CXC2 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC25,94■■□□□ 1,74
Gm28043E0CXC2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC25,91■■□□□ 1,74
Gm28043E0CXC2 AC153504.1-201ENSMUST00000218379 2290 ntBASIC25,91■■□□□ 1,74
Gm28043E0CXC2 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25,91■■□□□ 1,74
Gm28043E0CXC2 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC25,9■■□□□ 1,74
Gm28043E0CXC2 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25,89■■□□□ 1,74
Gm28043E0CXC2 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC25,89■■□□□ 1,73
Gm28043E0CXC2 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25,87■■□□□ 1,73
Gm28043E0CXC2 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC25,85■■□□□ 1,73
Gm28043E0CXC2 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC25,85■■□□□ 1,73
Gm28043E0CXC2 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25,84■■□□□ 1,73
Gm28043E0CXC2 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC25,83■■□□□ 1,73
Gm28043E0CXC2 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC25,83■■□□□ 1,73
Gm28043E0CXC2 Gm17082-201ENSMUST00000166043 1091 ntBASIC25,81■■□□□ 1,72
Gm28043E0CXC2 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25,81■■□□□ 1,72
Gm28043E0CXC2 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC25,81■■□□□ 1,72
Gm28043E0CXC2 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC25,79■■□□□ 1,72
Gm28043E0CXC2 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25,78■■□□□ 1,72
Gm28043E0CXC2 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC25,78■■□□□ 1,72
Gm28043E0CXC2 Gm26115-201ENSMUST00000175605 87 ntBASIC25,74■■□□□ 1,71
Gm28043E0CXC2 AL845457.1-201ENSMUST00000197244 68 ntBASIC25,74■■□□□ 1,71
Gm28043E0CXC2 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25,73■■□□□ 1,71
Gm28043E0CXC2 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC25,72■■□□□ 1,71
Gm28043E0CXC2 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25,71■■□□□ 1,71
Gm28043E0CXC2 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25,69■■□□□ 1,7
Gm28043E0CXC2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25,68■■□□□ 1,7
Gm28043E0CXC2 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25,68■■□□□ 1,7
Gm28043E0CXC2 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC25,67■■□□□ 1,7
Gm28043E0CXC2 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25,67■■□□□ 1,7
Gm28043E0CXC2 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25,66■■□□□ 1,7
Retrieved 100 of 76,532 protein–RNA pairs in 10,9 ms