Protein–RNA interactions for Protein: A0A140T8Q4

Igkv3-4, Immunoglobulin kappa variable 3-4 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-4A0A140T8Q4 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Igkv3-4A0A140T8Q4 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC16.91■□□□□ 0.3
Igkv3-4A0A140T8Q4 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Igkv3-4A0A140T8Q4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Igkv3-4A0A140T8Q4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv3-4A0A140T8Q4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Igkv3-4A0A140T8Q4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Igkv3-4A0A140T8Q4 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Igkv3-4A0A140T8Q4 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv3-4A0A140T8Q4 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv3-4A0A140T8Q4 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Igkv3-4A0A140T8Q4 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Igkv3-4A0A140T8Q4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Igkv3-4A0A140T8Q4 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Igkv3-4A0A140T8Q4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Igkv3-4A0A140T8Q4 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv3-4A0A140T8Q4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Igkv3-4A0A140T8Q4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Igkv3-4A0A140T8Q4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv3-4A0A140T8Q4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv3-4A0A140T8Q4 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC16.7■□□□□ 0.26
Igkv3-4A0A140T8Q4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Igkv3-4A0A140T8Q4 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Igkv3-4A0A140T8Q4 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Igkv3-4A0A140T8Q4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Igkv3-4A0A140T8Q4 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Igkv3-4A0A140T8Q4 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Igkv3-4A0A140T8Q4 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv3-4A0A140T8Q4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Igkv3-4A0A140T8Q4 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Igkv3-4A0A140T8Q4 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Igkv3-4A0A140T8Q4 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC16.64■□□□□ 0.25
Igkv3-4A0A140T8Q4 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Igkv3-4A0A140T8Q4 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Igkv3-4A0A140T8Q4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Igkv3-4A0A140T8Q4 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Igkv3-4A0A140T8Q4 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Igkv3-4A0A140T8Q4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv3-4A0A140T8Q4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Igkv3-4A0A140T8Q4 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Igkv3-4A0A140T8Q4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Igkv3-4A0A140T8Q4 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Igkv3-4A0A140T8Q4 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv3-4A0A140T8Q4 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv3-4A0A140T8Q4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Igkv3-4A0A140T8Q4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Igkv3-4A0A140T8Q4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Igkv3-4A0A140T8Q4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC16.5■□□□□ 0.23
Igkv3-4A0A140T8Q4 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Igkv3-4A0A140T8Q4 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Igkv3-4A0A140T8Q4 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Igkv3-4A0A140T8Q4 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Igkv3-4A0A140T8Q4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC16.43■□□□□ 0.22
Igkv3-4A0A140T8Q4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv3-4A0A140T8Q4 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Igkv3-4A0A140T8Q4 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Igkv3-4A0A140T8Q4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
Igkv3-4A0A140T8Q4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Igkv3-4A0A140T8Q4 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv3-4A0A140T8Q4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC16.38■□□□□ 0.21
Igkv3-4A0A140T8Q4 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Igkv3-4A0A140T8Q4 AC153504.1-201ENSMUST00000218379 2290 ntBASIC16.37■□□□□ 0.21
Igkv3-4A0A140T8Q4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv3-4A0A140T8Q4 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv3-4A0A140T8Q4 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Igkv3-4A0A140T8Q4 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC16.36■□□□□ 0.21
Igkv3-4A0A140T8Q4 Gm27325-201ENSMUST00000175467 74 ntBASIC16.36■□□□□ 0.21
Igkv3-4A0A140T8Q4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Igkv3-4A0A140T8Q4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Igkv3-4A0A140T8Q4 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Igkv3-4A0A140T8Q4 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Igkv3-4A0A140T8Q4 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.33■□□□□ 0.21
Igkv3-4A0A140T8Q4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Igkv3-4A0A140T8Q4 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Igkv3-4A0A140T8Q4 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv3-4A0A140T8Q4 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Igkv3-4A0A140T8Q4 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Igkv3-4A0A140T8Q4 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Igkv3-4A0A140T8Q4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv3-4A0A140T8Q4 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Igkv3-4A0A140T8Q4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC16.27■□□□□ 0.2
Igkv3-4A0A140T8Q4 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Igkv3-4A0A140T8Q4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Igkv3-4A0A140T8Q4 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv3-4A0A140T8Q4 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Igkv3-4A0A140T8Q4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Igkv3-4A0A140T8Q4 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv3-4A0A140T8Q4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Igkv3-4A0A140T8Q4 Gm2415-204ENSMUST00000190235 2004 ntBASIC16.24■□□□□ 0.19
Igkv3-4A0A140T8Q4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv3-4A0A140T8Q4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Igkv3-4A0A140T8Q4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Igkv3-4A0A140T8Q4 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv3-4A0A140T8Q4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Igkv3-4A0A140T8Q4 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
Igkv3-4A0A140T8Q4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC16.2■□□□□ 0.18
Igkv3-4A0A140T8Q4 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Igkv3-4A0A140T8Q4 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Igkv3-4A0A140T8Q4 Gm25238-201ENSMUST00000174914 89 ntBASIC16.19■□□□□ 0.18
Igkv3-4A0A140T8Q4 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 313.7 ms