Protein–RNA interactions for Protein: A0A0B4J1P8

Trbv13-1, T cell receptor beta, variable 13-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-1A0A0B4J1P8 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trbv13-1A0A0B4J1P8 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trbv13-1A0A0B4J1P8 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.3■□□□□ 0.84
Trbv13-1A0A0B4J1P8 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trbv13-1A0A0B4J1P8 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.28■□□□□ 0.84
Trbv13-1A0A0B4J1P8 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trbv13-1A0A0B4J1P8 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trbv13-1A0A0B4J1P8 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trbv13-1A0A0B4J1P8 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trbv13-1A0A0B4J1P8 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trbv13-1A0A0B4J1P8 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trbv13-1A0A0B4J1P8 Gm26115-201ENSMUST00000175605 87 ntBASIC20.17■□□□□ 0.82
Trbv13-1A0A0B4J1P8 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trbv13-1A0A0B4J1P8 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trbv13-1A0A0B4J1P8 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.13■□□□□ 0.81
Trbv13-1A0A0B4J1P8 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trbv13-1A0A0B4J1P8 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trbv13-1A0A0B4J1P8 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trbv13-1A0A0B4J1P8 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.06■□□□□ 0.8
Trbv13-1A0A0B4J1P8 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trbv13-1A0A0B4J1P8 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trbv13-1A0A0B4J1P8 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.05■□□□□ 0.8
Trbv13-1A0A0B4J1P8 Gm8109-201ENSMUST00000194076 746 ntBASIC20.05■□□□□ 0.8
Trbv13-1A0A0B4J1P8 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Trbv13-1A0A0B4J1P8 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC19.98■□□□□ 0.79
Trbv13-1A0A0B4J1P8 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trbv13-1A0A0B4J1P8 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Trbv13-1A0A0B4J1P8 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trbv13-1A0A0B4J1P8 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trbv13-1A0A0B4J1P8 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
Trbv13-1A0A0B4J1P8 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trbv13-1A0A0B4J1P8 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Trbv13-1A0A0B4J1P8 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv13-1A0A0B4J1P8 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trbv13-1A0A0B4J1P8 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv13-1A0A0B4J1P8 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trbv13-1A0A0B4J1P8 Gm17082-201ENSMUST00000166043 1091 ntBASIC19.82■□□□□ 0.76
Trbv13-1A0A0B4J1P8 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trbv13-1A0A0B4J1P8 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trbv13-1A0A0B4J1P8 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trbv13-1A0A0B4J1P8 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trbv13-1A0A0B4J1P8 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trbv13-1A0A0B4J1P8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trbv13-1A0A0B4J1P8 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC19.76■□□□□ 0.75
Trbv13-1A0A0B4J1P8 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trbv13-1A0A0B4J1P8 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trbv13-1A0A0B4J1P8 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Trbv13-1A0A0B4J1P8 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trbv13-1A0A0B4J1P8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Trbv13-1A0A0B4J1P8 Gm27322-201ENSMUST00000184007 104 ntBASIC19.71■□□□□ 0.75
Trbv13-1A0A0B4J1P8 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.71■□□□□ 0.75
Trbv13-1A0A0B4J1P8 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trbv13-1A0A0B4J1P8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trbv13-1A0A0B4J1P8 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Trbv13-1A0A0B4J1P8 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trbv13-1A0A0B4J1P8 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trbv13-1A0A0B4J1P8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv13-1A0A0B4J1P8 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv13-1A0A0B4J1P8 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trbv13-1A0A0B4J1P8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trbv13-1A0A0B4J1P8 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC19.62■□□□□ 0.73
Trbv13-1A0A0B4J1P8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trbv13-1A0A0B4J1P8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trbv13-1A0A0B4J1P8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trbv13-1A0A0B4J1P8 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Trbv13-1A0A0B4J1P8 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trbv13-1A0A0B4J1P8 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC19.51■□□□□ 0.71
Trbv13-1A0A0B4J1P8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.51■□□□□ 0.71
Trbv13-1A0A0B4J1P8 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trbv13-1A0A0B4J1P8 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trbv13-1A0A0B4J1P8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trbv13-1A0A0B4J1P8 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC19.41■□□□□ 0.7
Trbv13-1A0A0B4J1P8 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trbv13-1A0A0B4J1P8 Gm24804-201ENSMUST00000174982 85 ntBASIC19.4■□□□□ 0.7
Trbv13-1A0A0B4J1P8 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC19.39■□□□□ 0.69
Trbv13-1A0A0B4J1P8 AL845457.1-201ENSMUST00000197244 68 ntBASIC19.39■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Trbv13-1A0A0B4J1P8 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.34■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Trbv13-1A0A0B4J1P8 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC19.33■□□□□ 0.69
Trbv13-1A0A0B4J1P8 AC166822.3-201ENSMUST00000227394 661 ntBASIC19.33■□□□□ 0.68
Trbv13-1A0A0B4J1P8 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trbv13-1A0A0B4J1P8 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv13-1A0A0B4J1P8 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC19.29■□□□□ 0.68
Trbv13-1A0A0B4J1P8 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.29■□□□□ 0.68
Trbv13-1A0A0B4J1P8 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trbv13-1A0A0B4J1P8 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Trbv13-1A0A0B4J1P8 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Trbv13-1A0A0B4J1P8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms