Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trav6d-7A0A075B6B0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Trav6d-7A0A075B6B0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Trav6d-7A0A075B6B0 Rab21-202ENSMUST00000218831 843 ntBASIC20.95■□□□□ 0.94
Trav6d-7A0A075B6B0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Trav6d-7A0A075B6B0 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trav6d-7A0A075B6B0 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Trav6d-7A0A075B6B0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.91■□□□□ 0.94
Trav6d-7A0A075B6B0 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.89■□□□□ 0.93
Trav6d-7A0A075B6B0 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav6d-7A0A075B6B0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav6d-7A0A075B6B0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav6d-7A0A075B6B0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav6d-7A0A075B6B0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Trav6d-7A0A075B6B0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav6d-7A0A075B6B0 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Trav6d-7A0A075B6B0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6d-7A0A075B6B0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6d-7A0A075B6B0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav6d-7A0A075B6B0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav6d-7A0A075B6B0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav6d-7A0A075B6B0 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC20.7■□□□□ 0.9
Trav6d-7A0A075B6B0 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav6d-7A0A075B6B0 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC20.69■□□□□ 0.9
Trav6d-7A0A075B6B0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav6d-7A0A075B6B0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav6d-7A0A075B6B0 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC20.64■□□□□ 0.89
Trav6d-7A0A075B6B0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav6d-7A0A075B6B0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav6d-7A0A075B6B0 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav6d-7A0A075B6B0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav6d-7A0A075B6B0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Trav6d-7A0A075B6B0 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trav6d-7A0A075B6B0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav6d-7A0A075B6B0 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav6d-7A0A075B6B0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Trav6d-7A0A075B6B0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav6d-7A0A075B6B0 Gm26115-201ENSMUST00000175605 87 ntBASIC20.52■□□□□ 0.88
Trav6d-7A0A075B6B0 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.51■□□□□ 0.87
Trav6d-7A0A075B6B0 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav6d-7A0A075B6B0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.49■□□□□ 0.87
Trav6d-7A0A075B6B0 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trav6d-7A0A075B6B0 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav6d-7A0A075B6B0 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Trav6d-7A0A075B6B0 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav6d-7A0A075B6B0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6d-7A0A075B6B0 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.42■□□□□ 0.86
Trav6d-7A0A075B6B0 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6d-7A0A075B6B0 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav6d-7A0A075B6B0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.41■□□□□ 0.86
Trav6d-7A0A075B6B0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Trav6d-7A0A075B6B0 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav6d-7A0A075B6B0 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC20.4■□□□□ 0.86
Trav6d-7A0A075B6B0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav6d-7A0A075B6B0 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC20.39■□□□□ 0.85
Trav6d-7A0A075B6B0 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Trav6d-7A0A075B6B0 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav6d-7A0A075B6B0 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav6d-7A0A075B6B0 Gm8109-201ENSMUST00000194076 746 ntBASIC20.34■□□□□ 0.85
Trav6d-7A0A075B6B0 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav6d-7A0A075B6B0 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trav6d-7A0A075B6B0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav6d-7A0A075B6B0 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trav6d-7A0A075B6B0 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trav6d-7A0A075B6B0 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC20.3■□□□□ 0.84
Trav6d-7A0A075B6B0 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.28■□□□□ 0.84
Trav6d-7A0A075B6B0 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6d-7A0A075B6B0 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trav6d-7A0A075B6B0 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Trav6d-7A0A075B6B0 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trav6d-7A0A075B6B0 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.19■□□□□ 0.82
Trav6d-7A0A075B6B0 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.18■□□□□ 0.82
Trav6d-7A0A075B6B0 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Trav6d-7A0A075B6B0 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trav6d-7A0A075B6B0 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6d-7A0A075B6B0 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trav6d-7A0A075B6B0 Gm17082-201ENSMUST00000166043 1091 ntBASIC20.1■□□□□ 0.81
Trav6d-7A0A075B6B0 Gm27322-201ENSMUST00000184007 104 ntBASIC20.08■□□□□ 0.81
Trav6d-7A0A075B6B0 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Trav6d-7A0A075B6B0 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trav6d-7A0A075B6B0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Trav6d-7A0A075B6B0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Trav6d-7A0A075B6B0 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Trav6d-7A0A075B6B0 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.05■□□□□ 0.8
Trav6d-7A0A075B6B0 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav6d-7A0A075B6B0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav6d-7A0A075B6B0 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Trav6d-7A0A075B6B0 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Trav6d-7A0A075B6B0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav6d-7A0A075B6B0 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.02■□□□□ 0.8
Trav6d-7A0A075B6B0 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav6d-7A0A075B6B0 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav6d-7A0A075B6B0 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Trav6d-7A0A075B6B0 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav6d-7A0A075B6B0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trav6d-7A0A075B6B0 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.95■□□□□ 0.78
Trav6d-7A0A075B6B0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav6d-7A0A075B6B0 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav6d-7A0A075B6B0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6d-7A0A075B6B0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 1359.3 ms