Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC22,76■■□□□ 1,23
Trav5-4A0A075B652 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC22,76■■□□□ 1,23
Trav5-4A0A075B652 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC22,75■■□□□ 1,23
Trav5-4A0A075B652 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC22,74■■□□□ 1,23
Trav5-4A0A075B652 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC22,7■■□□□ 1,22
Trav5-4A0A075B652 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC22,7■■□□□ 1,22
Trav5-4A0A075B652 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC22,67■■□□□ 1,22
Trav5-4A0A075B652 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC22,6■■□□□ 1,21
Trav5-4A0A075B652 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC22,55■■□□□ 1,2
Trav5-4A0A075B652 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC22,54■■□□□ 1,2
Trav5-4A0A075B652 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC22,53■■□□□ 1,2
Trav5-4A0A075B652 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC22,52■■□□□ 1,2
Trav5-4A0A075B652 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC22,52■■□□□ 1,2
Trav5-4A0A075B652 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC22,51■■□□□ 1,19
Trav5-4A0A075B652 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC22,48■■□□□ 1,19
Trav5-4A0A075B652 Rab21-202ENSMUST00000218831 843 ntBASIC22,48■■□□□ 1,19
Trav5-4A0A075B652 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC22,46■■□□□ 1,19
Trav5-4A0A075B652 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC22,39■■□□□ 1,17
Trav5-4A0A075B652 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC22,38■■□□□ 1,17
Trav5-4A0A075B652 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC22,38■■□□□ 1,17
Trav5-4A0A075B652 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22,37■■□□□ 1,17
Trav5-4A0A075B652 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC22,37■■□□□ 1,17
Trav5-4A0A075B652 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC22,36■■□□□ 1,17
Trav5-4A0A075B652 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC22,36■■□□□ 1,17
Trav5-4A0A075B652 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC22,35■■□□□ 1,17
Trav5-4A0A075B652 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC22,35■■□□□ 1,17
Trav5-4A0A075B652 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC22,32■■□□□ 1,16
Trav5-4A0A075B652 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC22,31■■□□□ 1,16
Trav5-4A0A075B652 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC22,31■■□□□ 1,16
Trav5-4A0A075B652 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC22,3■■□□□ 1,16
Trav5-4A0A075B652 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC22,29■■□□□ 1,16
Trav5-4A0A075B652 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC22,27■■□□□ 1,16
Trav5-4A0A075B652 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC22,26■■□□□ 1,15
Trav5-4A0A075B652 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC22,26■■□□□ 1,15
Trav5-4A0A075B652 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC22,25■■□□□ 1,15
Trav5-4A0A075B652 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC22,25■■□□□ 1,15
Trav5-4A0A075B652 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC22,25■■□□□ 1,15
Trav5-4A0A075B652 Zfp131-207ENSMUST00000224946 1783 ntBASIC22,22■■□□□ 1,15
Trav5-4A0A075B652 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC22,22■■□□□ 1,15
Trav5-4A0A075B652 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC22,22■■□□□ 1,15
Trav5-4A0A075B652 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC22,21■■□□□ 1,15
Trav5-4A0A075B652 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC22,21■■□□□ 1,15
Trav5-4A0A075B652 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC22,17■■□□□ 1,14
Trav5-4A0A075B652 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC22,17■■□□□ 1,14
Trav5-4A0A075B652 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC22,16■■□□□ 1,14
Trav5-4A0A075B652 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC22,14■■□□□ 1,14
Trav5-4A0A075B652 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC22,14■■□□□ 1,13
Trav5-4A0A075B652 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC22,14■■□□□ 1,13
Trav5-4A0A075B652 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22,11■■□□□ 1,13
Trav5-4A0A075B652 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC22,1■■□□□ 1,13
Trav5-4A0A075B652 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC22,1■■□□□ 1,13
Trav5-4A0A075B652 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC22,08■■□□□ 1,13
Trav5-4A0A075B652 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22,07■■□□□ 1,12
Trav5-4A0A075B652 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC22,06■■□□□ 1,12
Trav5-4A0A075B652 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC22,05■■□□□ 1,12
Trav5-4A0A075B652 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC22,05■■□□□ 1,12
Trav5-4A0A075B652 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC22,05■■□□□ 1,12
Trav5-4A0A075B652 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22,03■■□□□ 1,12
Trav5-4A0A075B652 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC22,03■■□□□ 1,12
Trav5-4A0A075B652 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC22,03■■□□□ 1,12
Trav5-4A0A075B652 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC22,01■■□□□ 1,11
Trav5-4A0A075B652 Gm25262-201ENSMUST00000174934 133 ntBASIC22■■□□□ 1,11
Trav5-4A0A075B652 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC21,98■■□□□ 1,11
Trav5-4A0A075B652 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC21,97■■□□□ 1,11
Trav5-4A0A075B652 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC21,91■■□□□ 1,1
Trav5-4A0A075B652 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC21,9■■□□□ 1,1
Trav5-4A0A075B652 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC21,89■■□□□ 1,09
Trav5-4A0A075B652 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21,86■■□□□ 1,09
Trav5-4A0A075B652 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC21,83■■□□□ 1,09
Trav5-4A0A075B652 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21,83■■□□□ 1,08
Trav5-4A0A075B652 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21,82■■□□□ 1,08
Trav5-4A0A075B652 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC21,8■■□□□ 1,08
Trav5-4A0A075B652 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21,8■■□□□ 1,08
Trav5-4A0A075B652 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC21,8■■□□□ 1,08
Trav5-4A0A075B652 AL845457.1-201ENSMUST00000197244 68 ntBASIC21,77■■□□□ 1,08
Trav5-4A0A075B652 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC21,77■■□□□ 1,08
Trav5-4A0A075B652 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21,76■■□□□ 1,07
Trav5-4A0A075B652 Gm2415-204ENSMUST00000190235 2004 ntBASIC21,76■■□□□ 1,07
Trav5-4A0A075B652 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21,75■■□□□ 1,07
Trav5-4A0A075B652 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21,74■■□□□ 1,07
Trav5-4A0A075B652 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC21,73■■□□□ 1,07
Trav5-4A0A075B652 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC21,72■■□□□ 1,07
Trav5-4A0A075B652 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC21,67■■□□□ 1,06
Trav5-4A0A075B652 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21,67■■□□□ 1,06
Trav5-4A0A075B652 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,67■■□□□ 1,06
Trav5-4A0A075B652 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21,66■■□□□ 1,06
Trav5-4A0A075B652 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC21,65■■□□□ 1,06
Trav5-4A0A075B652 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21,64■■□□□ 1,05
Trav5-4A0A075B652 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC21,64■■□□□ 1,05
Trav5-4A0A075B652 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC21,63■■□□□ 1,05
Trav5-4A0A075B652 Mipep-204ENSMUST00000225043 1548 ntBASIC21,63■■□□□ 1,05
Trav5-4A0A075B652 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21,63■■□□□ 1,05
Trav5-4A0A075B652 Gm6658-202ENSMUST00000209493 1885 ntBASIC21,62■■□□□ 1,05
Trav5-4A0A075B652 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21,62■■□□□ 1,05
Trav5-4A0A075B652 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC21,6■■□□□ 1,05
Trav5-4A0A075B652 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21,57■■□□□ 1,04
Trav5-4A0A075B652 Zxda-201ENSMUST00000117281 2621 ntBASIC21,57■■□□□ 1,04
Trav5-4A0A075B652 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC21,56■■□□□ 1,04
Trav5-4A0A075B652 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21,56■■□□□ 1,04
Trav5-4A0A075B652 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC21,56■■□□□ 1,04
Retrieved 100 of 76,532 protein–RNA pairs in 11,1 ms