Protein–RNA interactions for Protein: A0A075B640

Trav7-6, T cell receptor alpha variable 7-6 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-6A0A075B640 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Trav7-6A0A075B640 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7-6A0A075B640 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Trav7-6A0A075B640 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7-6A0A075B640 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav7-6A0A075B640 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC18.84■□□□□ 0.61
Trav7-6A0A075B640 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav7-6A0A075B640 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC18.83■□□□□ 0.6
Trav7-6A0A075B640 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7-6A0A075B640 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Trav7-6A0A075B640 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav7-6A0A075B640 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC18.79■□□□□ 0.6
Trav7-6A0A075B640 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav7-6A0A075B640 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav7-6A0A075B640 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC18.74■□□□□ 0.59
Trav7-6A0A075B640 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Trav7-6A0A075B640 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC18.69■□□□□ 0.58
Trav7-6A0A075B640 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Trav7-6A0A075B640 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Trav7-6A0A075B640 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Trav7-6A0A075B640 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Trav7-6A0A075B640 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.58■□□□□ 0.57
Trav7-6A0A075B640 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Trav7-6A0A075B640 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC18.57■□□□□ 0.56
Trav7-6A0A075B640 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Trav7-6A0A075B640 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Trav7-6A0A075B640 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Trav7-6A0A075B640 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Trav7-6A0A075B640 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Trav7-6A0A075B640 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-6A0A075B640 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-6A0A075B640 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Trav7-6A0A075B640 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7-6A0A075B640 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Trav7-6A0A075B640 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC18.48■□□□□ 0.55
Trav7-6A0A075B640 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC18.47■□□□□ 0.55
Trav7-6A0A075B640 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC18.47■□□□□ 0.55
Trav7-6A0A075B640 Zxda-201ENSMUST00000117281 2621 ntBASIC18.47■□□□□ 0.55
Trav7-6A0A075B640 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Trav7-6A0A075B640 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trav7-6A0A075B640 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-6A0A075B640 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trav7-6A0A075B640 Rab21-202ENSMUST00000218831 843 ntBASIC18.4■□□□□ 0.54
Trav7-6A0A075B640 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trav7-6A0A075B640 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trav7-6A0A075B640 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7-6A0A075B640 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trav7-6A0A075B640 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trav7-6A0A075B640 Zfp131-207ENSMUST00000224946 1783 ntBASIC18.32■□□□□ 0.52
Trav7-6A0A075B640 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trav7-6A0A075B640 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Trav7-6A0A075B640 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7-6A0A075B640 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7-6A0A075B640 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav7-6A0A075B640 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav7-6A0A075B640 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC18.27■□□□□ 0.52
Trav7-6A0A075B640 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav7-6A0A075B640 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18.26■□□□□ 0.51
Trav7-6A0A075B640 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC18.26■□□□□ 0.51
Trav7-6A0A075B640 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav7-6A0A075B640 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trav7-6A0A075B640 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC18.24■□□□□ 0.51
Trav7-6A0A075B640 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav7-6A0A075B640 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trav7-6A0A075B640 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav7-6A0A075B640 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Trav7-6A0A075B640 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Trav7-6A0A075B640 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Trav7-6A0A075B640 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Trav7-6A0A075B640 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trav7-6A0A075B640 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Trav7-6A0A075B640 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7-6A0A075B640 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav7-6A0A075B640 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC18.15■□□□□ 0.5
Trav7-6A0A075B640 AC153504.1-201ENSMUST00000218379 2290 ntBASIC18.15■□□□□ 0.5
Trav7-6A0A075B640 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Trav7-6A0A075B640 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7-6A0A075B640 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trav7-6A0A075B640 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav7-6A0A075B640 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Trav7-6A0A075B640 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav7-6A0A075B640 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-6A0A075B640 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-6A0A075B640 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav7-6A0A075B640 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7-6A0A075B640 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav7-6A0A075B640 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav7-6A0A075B640 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7-6A0A075B640 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trav7-6A0A075B640 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC18.06■□□□□ 0.48
Trav7-6A0A075B640 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7-6A0A075B640 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav7-6A0A075B640 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav7-6A0A075B640 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7-6A0A075B640 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav7-6A0A075B640 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.03■□□□□ 0.48
Trav7-6A0A075B640 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav7-6A0A075B640 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-6A0A075B640 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trav7-6A0A075B640 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms