Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trav6-6A0A075B603 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trav6-6A0A075B603 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trav6-6A0A075B603 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC20.1■□□□□ 0.81
Trav6-6A0A075B603 Zxda-201ENSMUST00000117281 2621 ntBASIC20.1■□□□□ 0.81
Trav6-6A0A075B603 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav6-6A0A075B603 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trav6-6A0A075B603 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
Trav6-6A0A075B603 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trav6-6A0A075B603 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC20.06■□□□□ 0.8
Trav6-6A0A075B603 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Trav6-6A0A075B603 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Trav6-6A0A075B603 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Trav6-6A0A075B603 Gm27325-201ENSMUST00000175467 74 ntBASIC20.01■□□□□ 0.79
Trav6-6A0A075B603 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Trav6-6A0A075B603 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trav6-6A0A075B603 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trav6-6A0A075B603 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav6-6A0A075B603 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trav6-6A0A075B603 AC153504.1-201ENSMUST00000218379 2290 ntBASIC19.96■□□□□ 0.79
Trav6-6A0A075B603 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav6-6A0A075B603 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trav6-6A0A075B603 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-6A0A075B603 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav6-6A0A075B603 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6-6A0A075B603 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trav6-6A0A075B603 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC19.9■□□□□ 0.78
Trav6-6A0A075B603 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav6-6A0A075B603 Gm25238-201ENSMUST00000174914 89 ntBASIC19.86■□□□□ 0.77
Trav6-6A0A075B603 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
Trav6-6A0A075B603 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav6-6A0A075B603 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav6-6A0A075B603 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav6-6A0A075B603 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav6-6A0A075B603 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC19.8■□□□□ 0.76
Trav6-6A0A075B603 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav6-6A0A075B603 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav6-6A0A075B603 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-6A0A075B603 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav6-6A0A075B603 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trav6-6A0A075B603 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Trav6-6A0A075B603 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav6-6A0A075B603 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trav6-6A0A075B603 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trav6-6A0A075B603 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC19.64■□□□□ 0.73
Trav6-6A0A075B603 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trav6-6A0A075B603 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trav6-6A0A075B603 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC19.61■□□□□ 0.73
Trav6-6A0A075B603 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Trav6-6A0A075B603 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-6A0A075B603 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trav6-6A0A075B603 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-6A0A075B603 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trav6-6A0A075B603 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trav6-6A0A075B603 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC19.53■□□□□ 0.72
Trav6-6A0A075B603 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC19.53■□□□□ 0.72
Trav6-6A0A075B603 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trav6-6A0A075B603 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6-6A0A075B603 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6-6A0A075B603 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trav6-6A0A075B603 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC19.46■□□□□ 0.71
Trav6-6A0A075B603 Gm2415-204ENSMUST00000190235 2004 ntBASIC19.46■□□□□ 0.71
Trav6-6A0A075B603 Gm9905-201ENSMUST00000065740 1845 ntBASIC19.44■□□□□ 0.7
Trav6-6A0A075B603 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Trav6-6A0A075B603 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6-6A0A075B603 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trav6-6A0A075B603 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6-6A0A075B603 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trav6-6A0A075B603 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC19.4■□□□□ 0.7
Trav6-6A0A075B603 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Trav6-6A0A075B603 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav6-6A0A075B603 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trav6-6A0A075B603 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trav6-6A0A075B603 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC19.35■□□□□ 0.69
Trav6-6A0A075B603 Rab21-202ENSMUST00000218831 843 ntBASIC19.34■□□□□ 0.69
Trav6-6A0A075B603 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Trav6-6A0A075B603 Gm6206-201ENSMUST00000133472 2199 ntBASIC19.32■□□□□ 0.68
Trav6-6A0A075B603 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav6-6A0A075B603 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-6A0A075B603 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav6-6A0A075B603 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6-6A0A075B603 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav6-6A0A075B603 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Trav6-6A0A075B603 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6-6A0A075B603 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6-6A0A075B603 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav6-6A0A075B603 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Trav6-6A0A075B603 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trav6-6A0A075B603 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC19.24■□□□□ 0.67
Trav6-6A0A075B603 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-6A0A075B603 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav6-6A0A075B603 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-6A0A075B603 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav6-6A0A075B603 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC19.21■□□□□ 0.67
Trav6-6A0A075B603 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav6-6A0A075B603 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav6-6A0A075B603 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC19.19■□□□□ 0.66
Trav6-6A0A075B603 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC19.19■□□□□ 0.66
Trav6-6A0A075B603 Zfp131-207ENSMUST00000224946 1783 ntBASIC19.19■□□□□ 0.66
Trav6-6A0A075B603 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms