Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Trav9-1A0A075B601 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Trav9-1A0A075B601 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Trav9-1A0A075B601 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC21.43■■□□□ 1.02
Trav9-1A0A075B601 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Trav9-1A0A075B601 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC21.34■■□□□ 1.01
Trav9-1A0A075B601 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav9-1A0A075B601 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trav9-1A0A075B601 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
Trav9-1A0A075B601 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC21.18■□□□□ 0.98
Trav9-1A0A075B601 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trav9-1A0A075B601 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav9-1A0A075B601 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trav9-1A0A075B601 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Trav9-1A0A075B601 Calm3-201ENSMUST00000019514 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Trav9-1A0A075B601 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC21.11■□□□□ 0.97
Trav9-1A0A075B601 9230104M06Rik-201ENSMUST00000180971 1963 ntBASIC21.09■□□□□ 0.97
Trav9-1A0A075B601 Emx1-201ENSMUST00000045942 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav9-1A0A075B601 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Trav9-1A0A075B601 Gnai2-202ENSMUST00000192615 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Trav9-1A0A075B601 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC21.05■□□□□ 0.96
Trav9-1A0A075B601 Nemp1-202ENSMUST00000118612 1522 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Trav9-1A0A075B601 Egln2-201ENSMUST00000080058 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Trav9-1A0A075B601 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC21■□□□□ 0.95
Trav9-1A0A075B601 Rab21-202ENSMUST00000218831 843 ntBASIC20.99■□□□□ 0.95
Trav9-1A0A075B601 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trav9-1A0A075B601 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC20.96■□□□□ 0.95
Trav9-1A0A075B601 Trp53i13-201ENSMUST00000060417 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav9-1A0A075B601 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trav9-1A0A075B601 Azin2-201ENSMUST00000030581 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trav9-1A0A075B601 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trav9-1A0A075B601 Zfp131-207ENSMUST00000224946 1783 ntBASIC20.93■□□□□ 0.94
Trav9-1A0A075B601 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav9-1A0A075B601 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Trav9-1A0A075B601 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav9-1A0A075B601 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Trav9-1A0A075B601 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Trav9-1A0A075B601 Mocs3-201ENSMUST00000099071 1973 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Trav9-1A0A075B601 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC20.86■□□□□ 0.93
Trav9-1A0A075B601 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC20.85■□□□□ 0.93
Trav9-1A0A075B601 Bod1-201ENSMUST00000058060 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav9-1A0A075B601 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav9-1A0A075B601 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Trav9-1A0A075B601 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC20.81■□□□□ 0.92
Trav9-1A0A075B601 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Trav9-1A0A075B601 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trav9-1A0A075B601 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Trav9-1A0A075B601 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trav9-1A0A075B601 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav9-1A0A075B601 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Trav9-1A0A075B601 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trav9-1A0A075B601 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Trav9-1A0A075B601 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav9-1A0A075B601 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav9-1A0A075B601 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC20.74■□□□□ 0.91
Trav9-1A0A075B601 Tprgl-201ENSMUST00000030896 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav9-1A0A075B601 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav9-1A0A075B601 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav9-1A0A075B601 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC20.7■□□□□ 0.9
Trav9-1A0A075B601 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav9-1A0A075B601 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav9-1A0A075B601 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav9-1A0A075B601 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav9-1A0A075B601 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav9-1A0A075B601 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Trav9-1A0A075B601 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.64■□□□□ 0.89
Trav9-1A0A075B601 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav9-1A0A075B601 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav9-1A0A075B601 Gm2415-204ENSMUST00000190235 2004 ntBASIC20.62■□□□□ 0.89
Trav9-1A0A075B601 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav9-1A0A075B601 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav9-1A0A075B601 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trav9-1A0A075B601 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav9-1A0A075B601 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav9-1A0A075B601 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav9-1A0A075B601 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav9-1A0A075B601 Gm25262-201ENSMUST00000174934 133 ntBASIC20.48■□□□□ 0.87
Trav9-1A0A075B601 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Trav9-1A0A075B601 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trav9-1A0A075B601 Gm6658-202ENSMUST00000209493 1885 ntBASIC20.47■□□□□ 0.87
Trav9-1A0A075B601 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC20.46■□□□□ 0.87
Trav9-1A0A075B601 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.43■□□□□ 0.86
Trav9-1A0A075B601 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav9-1A0A075B601 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.4■□□□□ 0.86
Trav9-1A0A075B601 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trav9-1A0A075B601 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.37■□□□□ 0.85
Trav9-1A0A075B601 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trav9-1A0A075B601 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav9-1A0A075B601 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav9-1A0A075B601 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav9-1A0A075B601 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav9-1A0A075B601 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC20.33■□□□□ 0.85
Trav9-1A0A075B601 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav9-1A0A075B601 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav9-1A0A075B601 Mipep-204ENSMUST00000225043 1548 ntBASIC20.32■□□□□ 0.84
Trav9-1A0A075B601 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trav9-1A0A075B601 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav9-1A0A075B601 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav9-1A0A075B601 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav9-1A0A075B601 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 9.7 ms