Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
H2afb2S4R1M3 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Gm37922-201ENSMUST00000195596 455 ntBASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Gm10012-201ENSMUST00000078252 192 ntBASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
H2afb2S4R1M3 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.93□□□□□ -0.34
H2afb2S4R1M3 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
H2afb2S4R1M3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
H2afb2S4R1M3 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms