Protein–RNA interactions for Protein: Q9WUH2

Lhx9, LIM/homeobox protein Lhx9, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx9Q9WUH2 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Lhx9Q9WUH2 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Rhox2g-201ENSMUST00000115169 795 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Gm12241-201ENSMUST00000118330 726 ntBASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Gm7584-201ENSMUST00000175829 940 ntBASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Gm6222-202ENSMUST00000182143 629 ntBASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Gm19163-201ENSMUST00000223313 780 ntBASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Lhx9Q9WUH2 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Gm11591-201ENSMUST00000120063 702 ntBASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Gm27243-201ENSMUST00000183964 521 ntBASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Lhx9Q9WUH2 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Gm6023-201ENSMUST00000118217 606 ntBASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Gm13786-201ENSMUST00000122371 333 ntBASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.28□□□□□ -0.44
Lhx9Q9WUH2 Gm43758-201ENSMUST00000199500 367 ntBASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 62.6 ms