Protein–RNA interactions for Protein: Q9D0C1

Rnf115, E3 ubiquitin-protein ligase RNF115, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf115Q9D0C1 Gm6334-201ENSMUST00000207083 228 ntBASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 CT573034.1-201ENSMUST00000222983 313 ntBASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Rnf115Q9D0C1 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Gm6023-201ENSMUST00000118217 606 ntBASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Gm20482-202ENSMUST00000174729 825 ntBASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Mospd4-201ENSMUST00000180618 576 ntBASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Gm37489-201ENSMUST00000191883 159 ntBASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Gm10608-202ENSMUST00000213924 676 ntBASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Mir433-201ENSMUST00000093564 124 ntBASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rnf115Q9D0C1 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Gm4986-201ENSMUST00000119731 549 ntBASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Gm2991-201ENSMUST00000173338 480 ntBASIC11.11□□□□□ -0.63
Rnf115Q9D0C1 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms