Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Gm15806-201ENSMUST00000120696 955 ntBASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Gm5422-201ENSMUST00000050717 2721 ntBASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Shmt2Q9CZN7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Gm12138-201ENSMUST00000122180 951 ntBASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Gm2495-201ENSMUST00000191160 466 ntBASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Shmt2Q9CZN7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Hps3-201ENSMUST00000012580 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Gm12928-201ENSMUST00000117115 573 ntBASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Gm17794-201ENSMUST00000220252 955 ntBASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Gm5356-201ENSMUST00000093326 615 ntBASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt2Q9CZN7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms