Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Ska1Q9CPV1 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.26□□□□□ -0.45
Ska1Q9CPV1 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Gm43045-201ENSMUST00000198725 2095 ntBASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Mir7023-201ENSMUST00000185093 64 ntBASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 AC123834.1-201ENSMUST00000225346 2043 ntBASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ska1Q9CPV1 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Gm15487-201ENSMUST00000122373 465 ntBASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Gm21854-201ENSMUST00000179901 471 ntBASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Gm24694-201ENSMUST00000180054 110 ntBASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Gm27663-201ENSMUST00000184839 110 ntBASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.24□□□□□ -0.45
Ska1Q9CPV1 AC132863.2-201ENSMUST00000226643 799 ntBASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Gm9797-201ENSMUST00000052902 613 ntBASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ska1Q9CPV1 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.23□□□□□ -0.45
Ska1Q9CPV1 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms