Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TRGV9Q99603 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC12.5□□□□□ -0.41
TRGV9Q99603 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC12.5□□□□□ -0.41
TRGV9Q99603 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TRGV9Q99603 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.5□□□□□ -0.41
TRGV9Q99603 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.5□□□□□ -0.41
TRGV9Q99603 CD63-204ENST00000546939 779 ntTSL 3 BASIC12.5□□□□□ -0.41
TRGV9Q99603 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.5□□□□□ -0.41
TRGV9Q99603 AP001005.1-201ENST00000571755 1248 ntBASIC12.5□□□□□ -0.41
TRGV9Q99603 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.5□□□□□ -0.41
TRGV9Q99603 RN7SL510P-201ENST00000581311 263 ntBASIC12.5□□□□□ -0.41
TRGV9Q99603 AC073389.1-201ENST00000595595 795 ntBASIC12.5□□□□□ -0.41
TRGV9Q99603 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.5□□□□□ -0.41
TRGV9Q99603 Z83851.2-201ENST00000609564 659 ntBASIC12.5□□□□□ -0.41
TRGV9Q99603 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.5□□□□□ -0.41
TRGV9Q99603 AC004877.2-201ENST00000623941 599 ntBASIC12.5□□□□□ -0.41
TRGV9Q99603 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.5□□□□□ -0.41
TRGV9Q99603 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
TRGV9Q99603 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TRGV9Q99603 PGR-210ENST00000619228 3038 ntTSL 5 BASIC12.5□□□□□ -0.41
TRGV9Q99603 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TRGV9Q99603 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV9Q99603 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.49□□□□□ -0.41
TRGV9Q99603 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TRGV9Q99603 ZBTB45P2-201ENST00000452245 1531 ntBASIC12.49□□□□□ -0.41
TRGV9Q99603 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TRGV9Q99603 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV9Q99603 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 AL691432.1-201ENST00000596308 1422 ntBASIC12.49□□□□□ -0.41
TRGV9Q99603 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 AC002056.1-201ENST00000395613 760 ntBASIC12.49□□□□□ -0.41
TRGV9Q99603 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC12.49□□□□□ -0.41
TRGV9Q99603 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV9Q99603 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV9Q99603 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
TRGV9Q99603 KRT19P2-202ENST00000557173 1012 ntBASIC12.49□□□□□ -0.41
TRGV9Q99603 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
TRGV9Q99603 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 FLII-221ENST00000578558 2377 ntTSL 5 BASIC12.49□□□□□ -0.41
TRGV9Q99603 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC12.49□□□□□ -0.41
TRGV9Q99603 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TRGV9Q99603 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.48□□□□□ -0.41
TRGV9Q99603 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TRGV9Q99603 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms