Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rft1Q8C3B8 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Gm19220-201ENSMUST00000222682 803 ntBASIC11.59□□□□□ -0.55
Rft1Q8C3B8 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC11.59□□□□□ -0.55
Rft1Q8C3B8 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.59□□□□□ -0.55
Rft1Q8C3B8 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.58□□□□□ -0.55
Rft1Q8C3B8 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rft1Q8C3B8 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rft1Q8C3B8 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Gm15240-201ENSMUST00000118156 720 ntBASIC11.58□□□□□ -0.56
Rft1Q8C3B8 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Gm24420-201ENSMUST00000176676 59 ntBASIC11.58□□□□□ -0.56
Rft1Q8C3B8 H2-Pa-201ENSMUST00000182803 626 ntBASIC11.58□□□□□ -0.56
Rft1Q8C3B8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Gm5279-201ENSMUST00000199575 745 ntBASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rft1Q8C3B8 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC11.57□□□□□ -0.56
Rft1Q8C3B8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms