Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.28□□□□□ -0.12
Trim35Q8C006 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.28□□□□□ -0.12
Trim35Q8C006 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trim35Q8C006 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trim35Q8C006 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trim35Q8C006 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.28□□□□□ -0.12
Trim35Q8C006 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim35Q8C006 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim35Q8C006 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
Trim35Q8C006 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim35Q8C006 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim35Q8C006 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trim35Q8C006 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim35Q8C006 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim35Q8C006 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trim35Q8C006 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trim35Q8C006 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim35Q8C006 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Gm17061-201ENSMUST00000163167 499 ntBASIC14.27□□□□□ -0.13
Trim35Q8C006 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Trim35Q8C006 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Trim35Q8C006 Gm24158-201ENSMUST00000175263 71 ntBASIC14.27□□□□□ -0.13
Trim35Q8C006 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.27□□□□□ -0.13
Trim35Q8C006 Gm36994-201ENSMUST00000192941 492 ntBASIC14.27□□□□□ -0.13
Trim35Q8C006 Gm38225-201ENSMUST00000194001 393 ntBASIC14.27□□□□□ -0.13
Trim35Q8C006 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC14.27□□□□□ -0.13
Trim35Q8C006 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.27□□□□□ -0.13
Trim35Q8C006 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim35Q8C006 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.27□□□□□ -0.13
Trim35Q8C006 AC133189.3-201ENSMUST00000226269 878 ntBASIC14.27□□□□□ -0.13
Trim35Q8C006 AC158981.3-202ENSMUST00000228906 523 ntBASIC14.27□□□□□ -0.13
Trim35Q8C006 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC14.27□□□□□ -0.13
Trim35Q8C006 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Olfr492-201ENSMUST00000079865 945 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Trim35Q8C006 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Trim35Q8C006 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trim35Q8C006 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm7205-201ENSMUST00000196032 1323 ntBASIC14.26□□□□□ -0.13
Trim35Q8C006 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.26□□□□□ -0.13
Trim35Q8C006 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm15238-201ENSMUST00000119938 1296 ntBASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm12737-201ENSMUST00000142835 725 ntTSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm20617-202ENSMUST00000177332 758 ntTSL 3 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trim35Q8C006 Trav15d-3-201ENSMUST00000198604 167 ntBASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm43659-201ENSMUST00000200894 628 ntBASIC14.26□□□□□ -0.13
Trim35Q8C006 Gm42599-201ENSMUST00000201308 469 ntBASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms