Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Trim6Q8BGE7 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim6Q8BGE7 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim6Q8BGE7 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Trim6Q8BGE7 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim6Q8BGE7 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
Trim6Q8BGE7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.77□□□□□ -0.21
Trim6Q8BGE7 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Trim6Q8BGE7 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.76□□□□□ -0.21
Trim6Q8BGE7 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.76□□□□□ -0.21
Trim6Q8BGE7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Trim6Q8BGE7 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Gm23935-201ENSMUST00000102303 57 ntBASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Gm24270-201ENSMUST00000102326 57 ntBASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Gm13223-201ENSMUST00000118609 747 ntBASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Gm24245-201ENSMUST00000157318 57 ntBASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Gm43575-201ENSMUST00000196420 516 ntBASIC13.75□□□□□ -0.21
Trim6Q8BGE7 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms