Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Gm24255-201ENSMUST00000104481 128 ntBASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Rassf8-202ENSMUST00000058538 1131 ntBASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rc3h1Q4VGL6 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rc3h1Q4VGL6 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rc3h1Q4VGL6 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.02
Rc3h1Q4VGL6 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Gm23363-201ENSMUST00000175024 79 ntBASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Daam2-202ENSMUST00000224595 1926 ntBASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rc3h1Q4VGL6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Gm27243-201ENSMUST00000183964 521 ntBASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Mir339-201ENSMUST00000083659 96 ntBASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rc3h1Q4VGL6 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms