Protein–RNA interactions for Protein: Q02780

Nfia, Nuclear factor 1 A-type, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfiaQ02780 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Gm37827-201ENSMUST00000194486 1542 ntBASIC14.43□□□□□ -0.1
NfiaQ02780 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.43□□□□□ -0.1
NfiaQ02780 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NfiaQ02780 Gm13492-201ENSMUST00000119772 665 ntBASIC14.43□□□□□ -0.1
NfiaQ02780 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC14.43□□□□□ -0.1
NfiaQ02780 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.43□□□□□ -0.1
NfiaQ02780 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.43□□□□□ -0.1
NfiaQ02780 Tnfrsf17-201ENSMUST00000023140 815 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NfiaQ02780 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.43□□□□□ -0.1
NfiaQ02780 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NfiaQ02780 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NfiaQ02780 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
NfiaQ02780 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.42□□□□□ -0.1
NfiaQ02780 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NfiaQ02780 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC14.42□□□□□ -0.1
NfiaQ02780 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NfiaQ02780 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC14.42□□□□□ -0.1
NfiaQ02780 Gm25043-201ENSMUST00000158604 212 ntBASIC14.42□□□□□ -0.1
NfiaQ02780 Gm26361-201ENSMUST00000158868 186 ntBASIC14.42□□□□□ -0.1
NfiaQ02780 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
NfiaQ02780 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Gm25700-201ENSMUST00000177693 110 ntBASIC14.42□□□□□ -0.1
NfiaQ02780 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.42□□□□□ -0.1
NfiaQ02780 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Gm8712-201ENSMUST00000221090 701 ntBASIC14.42□□□□□ -0.1
NfiaQ02780 AC166095.1-201ENSMUST00000223731 1241 ntBASIC14.42□□□□□ -0.1
NfiaQ02780 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NfiaQ02780 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NfiaQ02780 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.42□□□□□ -0.1
NfiaQ02780 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NfiaQ02780 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
NfiaQ02780 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.41□□□□□ -0.1
NfiaQ02780 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NfiaQ02780 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Gm12058-201ENSMUST00000118614 437 ntBASIC14.41□□□□□ -0.1
NfiaQ02780 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.41□□□□□ -0.1
NfiaQ02780 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NfiaQ02780 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NfiaQ02780 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43.4 ms