Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
RPL39P62891 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RPL39P62891 FAM86EP-206ENST00000510506 987 ntBASIC11.37□□□□□ -0.59
RPL39P62891 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC11.37□□□□□ -0.59
RPL39P62891 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC11.37□□□□□ -0.59
RPL39P62891 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.37□□□□□ -0.59
RPL39P62891 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.37□□□□□ -0.59
RPL39P62891 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
RPL39P62891 AC004706.3-202ENST00000621574 984 ntBASIC11.37□□□□□ -0.59
RPL39P62891 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC11.37□□□□□ -0.59
RPL39P62891 LINC01101-201ENST00000622953 1884 ntBASIC11.37□□□□□ -0.59
RPL39P62891 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RPL39P62891 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.37□□□□□ -0.59
RPL39P62891 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.37□□□□□ -0.59
RPL39P62891 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.37□□□□□ -0.59
RPL39P62891 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.37□□□□□ -0.59
RPL39P62891 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RPL39P62891 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC11.37□□□□□ -0.59
RPL39P62891 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
RPL39P62891 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC11.37□□□□□ -0.59
RPL39P62891 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC11.37□□□□□ -0.59
RPL39P62891 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC11.37□□□□□ -0.59
RPL39P62891 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RPL39P62891 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 LINC00552-201ENST00000625151 2579 ntBASIC11.36□□□□□ -0.59
RPL39P62891 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
RPL39P62891 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 ZEB1-AS1-208ENST00000607166 2503 ntBASIC11.36□□□□□ -0.59
RPL39P62891 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.36□□□□□ -0.59
RPL39P62891 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC11.36□□□□□ -0.59
RPL39P62891 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.36□□□□□ -0.59
RPL39P62891 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.36□□□□□ -0.59
RPL39P62891 AC106795.1-205ENST00000512851 1056 ntBASIC11.36□□□□□ -0.59
RPL39P62891 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 AC138894.3-201ENST00000603787 634 ntBASIC11.36□□□□□ -0.59
RPL39P62891 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 AC116407.4-201ENST00000623319 1061 ntBASIC11.36□□□□□ -0.59
RPL39P62891 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 CICP4-201ENST00000447359 2812 ntBASIC11.36□□□□□ -0.59
RPL39P62891 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC11.36□□□□□ -0.59
RPL39P62891 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
RPL39P62891 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 AC006504.4-201ENST00000592118 1568 ntBASIC11.36□□□□□ -0.59
RPL39P62891 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC11.36□□□□□ -0.59
RPL39P62891 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC11.36□□□□□ -0.59
RPL39P62891 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
RPL39P62891 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms