Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cdh11P55288 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Cdh11P55288 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdh11P55288 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.82□□□□□ -0.52
Cdh11P55288 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdh11P55288 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC11.82□□□□□ -0.52
Cdh11P55288 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdh11P55288 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cdh11P55288 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Gm27772-201ENSMUST00000184900 187 ntBASIC11.82□□□□□ -0.52
Cdh11P55288 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.82□□□□□ -0.52
Cdh11P55288 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Gm7446-201ENSMUST00000221035 1240 ntBASIC11.82□□□□□ -0.52
Cdh11P55288 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.82□□□□□ -0.52
Cdh11P55288 AC150560.1-201ENSMUST00000227731 1187 ntBASIC11.82□□□□□ -0.52
Cdh11P55288 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Gm15222-202ENSMUST00000228667 1726 ntBASIC11.82□□□□□ -0.52
Cdh11P55288 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.82□□□□□ -0.52
Cdh11P55288 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cdh11P55288 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.82□□□□□ -0.52
Cdh11P55288 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cdh11P55288 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.81□□□□□ -0.52
Cdh11P55288 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Pck2-205ENSMUST00000226352 2784 ntBASIC11.81□□□□□ -0.52
Cdh11P55288 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cdh11P55288 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Gm15824-201ENSMUST00000119516 955 ntBASIC11.81□□□□□ -0.52
Cdh11P55288 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.81□□□□□ -0.52
Cdh11P55288 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC11.81□□□□□ -0.52
Cdh11P55288 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.81□□□□□ -0.52
Cdh11P55288 Gm5356-201ENSMUST00000093326 615 ntBASIC11.81□□□□□ -0.52
Cdh11P55288 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdh11P55288 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.81□□□□□ -0.52
Cdh11P55288 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC11.81□□□□□ -0.52
Cdh11P55288 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.81□□□□□ -0.52
Cdh11P55288 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Cdh11P55288 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cdh11P55288 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cdh11P55288 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.8□□□□□ -0.52
Cdh11P55288 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cdh11P55288 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cdh11P55288 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms